Gene Information

Name : Shew185_0718 (Shew185_0718)
Accession : YP_001364938.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Unknown
Product : transposase IS200-family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 860606 - 861043 bp
Length : 438 bp
Strand : +
Note : PFAM: transposase IS200-family protein; KEGG: she:Shewmr4_2336 transposase IS200-family protein

DNA sequence :
ATGGGCGATTATAGAAGTTCATCACATGTTTATTGGCGTTGCAAATATCATATTGTTTGGACTCCGAAGTACCGTTTTAA
AATTTTAAAAGGAAACCTTGGTAAGGAGTTATACAGGTCAATTTATATCCTTTGCAATATGAAGGGTTGTGAGGTTTTAG
AATTAAACGTTCAGATAGACCACGTTCACTTGGTAGTCATAATCCCGCCGAAGCTGTCAGTATCAACGCTGATGGGAGTA
TTGAAAGGAAGAAGTGCGATAAGGCTATTCAATAAATTCCCTCATGTACGTAAAAAGCTATGGGGCAATAGCTTTTGGGC
CAGAGGTTATTTTGTAGATACAGTAGGGGTTAATGAAGAAATCATTAGACGATATGTGCGCCATCAAGATAAACAAGATC
AGGAACATGAGGCTCAATTGTCGTTGCAGATGATGTAG

Protein sequence :
MGDYRSSSHVYWRCKYHIVWTPKYRFKILKGNLGKELYRSIYILCNMKGCEVLELNVQIDHVHLVVIIPPKLSVSTLMGV
LKGRSAIRLFNKFPHVRKKLWGNSFWARGYFVDTVGVNEEIIRRYVRHQDKQDQEHEAQLSLQMM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 3e-23 45
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 8e-23 42
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 2e-19 42
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 2e-21 41
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 3e-21 41