|
Name : Shew185_0716 (Shew185_0716) Accession : YP_001364936.1 Strain : Shewanella baltica OS185 Genome accession: NC_009665 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 857753 - 859159 bp Length : 1407 bp Strand : + Note : TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; KEGG: sbl:Sbal_3638 replicative DNA helicase DNA sequence : ATGTCACAACAAGGTGCTTTTAAGCCTAAAAGTAAGCCAAGAGATTTGCAACTTGATGGACTCAAGCTGCCACCGCATTC AATTGAGGCTGAACAATCGGTATTAGGCGGCTTGATGTTAGATGCCGAAGCGTGGGACAGGGTCGCTGAGGCCGTCGTAA AAGATGACTTTTACTCCCGCTCACACAAGATGATCTTCTCTGCCATGCACAGATTGGTCGATCTGGGGCAACCGATCGAT TTGATCACGGTTTCTGAACAGCTCGAAGTTGAAAATCAATTAGAAGATGCTGGCGGTTTTGCCTATTTAGGTGAAATTGC GAAAAATACCCCAAGTGCGGGTAACATTTTATCTTACGCCGAAATCGTCCGTGAACGCGCCGTAGTGCGTGACATGATCC GCGTAGCGCACGAAATTGCCGATGCAGGTTACAACCCAGAAGGCCGCGATTCGAGCGAATTACTCGACCTTGCTGAGAGT AAAGTCTTTAAGATCGCTGAGATGCGAACCAATTCCAACGAAGGTCCTGAAGGCATTAAAACCATTCTGGAAAAAACCGT CGATAAAATTGAGCAGCTTTATAATAACCCCCATAACGGTGTGACTGGGGTTTCGAGCGGCTTTAACGATCTGGATAAGA TGACCGCTGGCTTCCAGTCCGGTGACTTGATTATCGTTGCTGCGCGTCCTTCTATGGGTAAAACCACCTTCGCGATGAAC TTGTGCGAACAAGCCGCGATGAATGAAGACAAGCCGGTGCTTATTTTCAGTCTCGAGATGCCGTCAGAACAGATTATGAT GCGTATGTTGGCCTCCTTGGGCCGCGTCGATCAAACCAAAATCCGTACGGGCCAGCTCGATGATGAGGATTGGGCGCGGG TTTCATCGACTATGGGCATCATGCTCGAGCAAGGTAAAATGTATATCGATGATGGTTCGGGATTAACGCCGACAGAAGTT CGTAGCCGCGCGCGTCGTATCGCCCGTGAGTACGGTGGCTTATCGATGATCATGATAGATTACCTGCAGTTAATGCAGGT GCCTGCCTTGAAAGATAACCGTACCTTAGAGATTTCTGAGATTTCACGCTCCCTAAAGGCGTTAGCTAAAGAGTTGGAAA TCCCGATTATTGCCCTGTCGCAGCTTAACCGCTCGCTTGAGCAAAGAGCCGATAAGCGTCCAGTAAACTCGGATTTGCGT GAATCGGGCGCTATCGAGCAGGATGCGGATCTCATCATGTTTATTTATCGCGATGAAGTGTATAACAACGATTCTCAAGA TAAAGGTACGGCCGAAATCATTATTGGTAAGCAACGTAACGGCCCGATTGGTCGAGTGCGACTCACCTTCCAAGGGCAGT TTTCGCGCTTCGATAATTATGCCGGACCTCAGTTTGAAGAAGACTAA Protein sequence : MSQQGAFKPKSKPRDLQLDGLKLPPHSIEAEQSVLGGLMLDAEAWDRVAEAVVKDDFYSRSHKMIFSAMHRLVDLGQPID LITVSEQLEVENQLEDAGGFAYLGEIAKNTPSAGNILSYAEIVRERAVVRDMIRVAHEIADAGYNPEGRDSSELLDLAES KVFKIAEMRTNSNEGPEGIKTILEKTVDKIEQLYNNPHNGVTGVSSGFNDLDKMTAGFQSGDLIIVAARPSMGKTTFAMN LCEQAAMNEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDEDWARVSSTMGIMLEQGKMYIDDGSGLTPTEV RSRARRIAREYGGLSMIMIDYLQLMQVPALKDNRTLEISEISRSLKALAKELEIPIIALSQLNRSLEQRADKRPVNSDLR ESGAIEQDADLIMFIYRDEVYNNDSQDKGTAEIIIGKQRNGPIGRVRLTFQGQFSRFDNYAGPQFEED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 5e-104 | 51 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 9e-103 | 51 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-103 | 51 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 8e-99 | 50 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-102 | 49 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-93 | 48 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-93 | 48 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-87 | 47 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 3e-82 | 44 |
