Gene Information

Name : Shew185_0640 (Shew185_0640)
Accession : YP_001364864.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Resistance
Product : acriflavin resistance protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0841
EC number : -
Position : 777189 - 780278 bp
Length : 3090 bp
Strand : -
Note : PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_3722 acriflavin resistance protein

DNA sequence :
ATGAACATTGCAGAGTATTCGATACGCCACAAAGTCATCAGTTGGATGTTTGTGTTGCTGCTACTCGTGGGTGGCGGCGT
GAGTTTTACCGGTTTGGGGCAATTGGAATTCCCCGAATTTACCATTAAAGAAGCCCTAGTGATCACGGCTTACCCCGGCG
CATCACCTGAACAAGTTGAAGAAGAAGTCACGCTGCCGCTCGAAGATGCCCTGCAGCAACTCGATGCCATTAAGCATGTG
ACCTCGATTAACAGTGCGGGCCTGTCACAAATCCAAATTGAGATTAAAGAAAGCTACGACAAAACCACCCTGCCACAGGT
GTGGGATGAAGTGCGTCGTAAGGTCAACGACACGGCGGGCATCTTGCCACCGGGTACAACCGCGCCGCAGGTGATGGACG
ACTTTGGCGATGTGTATGGCATTTTATTTAATCTCTCAGGCCCCGATTACAGCAACCGCGAGTTAAGCAATTACGCCGAC
TATCTGCGCCGCGAACTCGTGCTAGTGCCCGGGGTGAAAAAAGTTTCAGTTGCAGGCAGCGTCACCGAGCAAGTGGTGAT
TGAAATCTCCCAGCAAAAGCTGTCGGCACTGGGGTTAGATCAAAGCTATATCTATGGTTTAGTGAACAATCAAAACGTGG
TCTCCAACGCGGGCAGTTTAGTGATTGGTGATAACCGTATCCGCATTCATCCCACGGGCGAATTTAGCAATGTGCAGGAT
CTGGCGCGCTTGATTGTCAGCCCACTGGGTAGCACTGAGCTGATTTACCTTGGCGACATTGCCAATATCGAAAAGGATTA
CGACGAAACCCCGAATGTGCTTTACCACAATAAGGGCGAAGCGGCGTTATCACTGGGGATTTCTTTCTCTAGTGGCGTGA
ACGTGGTTGAAGTTGGACAAAAGGTCAGTGACCGTTTAGCCGAGCTTGAATCCCAACGCCCAATCGGCATGAATTTAGCG
ACGGTTTACAATCAGAGTCAGGCGGTCGATGAGACAGTCAATGGCTTCTTAATCAACTTATTAGAATCCATTGCTATCGT
GATCGCCGTGCTCCTGCTGTTTATGGGGCTGCGCTCAGGCATGTTGATGGGCCTGATCTTACTGCTGACGATTCTAGGTA
CCTTTATCGTGATGAAAGTGCTGGGGATTGAGCTGCAACTCATCTCCCTCGGCGCACTCATTATCGCCCTTGGCATGTTG
GTCGATAACGCGATTGTGGTCACCGAAGGTATTTTGATTGGCCTGCGCCGTGGTAAAACTCGCCTCGAAGCGGCCAAGCA
AATTGTGGCTCAAACCCAGTGGCCGCTATTAGGCGCGACTGTGATTGCCATTATTGCCTTTGCGCCCATTGGCTTATCGC
AAAATGCCGCAGGTGAATTCTGCCGTTCTTTATTCCAAGTGTTGATGATTTCGCTGTTTATCAGCTGGATAACCGCCATC
ACCTTAACGCCGTTCTTCTGCCATCTGTTATTTAAGGATGCGCCGAGCGATGAAGAAGCACAAGACCCCTACAAGGGCTG
GTTTTTCAGCTTATATCGCGCAAGTTTAACCCTAGCGCTGCGCTTTAGATTGGTGAGTATTCTGCTGGTTGTAGCCATGC
TGTTCAGCGCTGTAGTGGGCTTTGGTCATATCAAGAATGTGTTTTTCCCTGCCTCTAACACGCCGATTTTCTTTGTGGAT
ATCTGGATGCCAGAAGGCACGGACATTAAGGCGACCGAACGCTTTACTGCCGATATTGAGCGCCAGTTACTGCAACAGAA
CGAGCAAAAAGATATTGGGCTAAAACACTTAACCAGCGTTATCGGCCAAGGCTCGCAGCGTTTCGTCCTACCTTATCAGC
CAGAAAAAGGCTATCCCGCCTTTGCCCAGTTGATAGTTGAAATGCAAGATTTGGCCGCCGTTAAAGCCTATATGCCAGAG
TTAGAAACCTTGTTAAATCAACGTTTCCCACAGGCACAATATCGCTTAAAAAACATGGAAAACGGTCCGTCGCCCGCAGC
CAAAATTGAGGCACGCTTCTACGGCGACAATCCTGAAGTGCTGCGCGCTTTAGGCGCCCAAGCCGAGGCCATTTTCCACG
CCGAACCGAGCATGGATGGCATACGTCACAACTGGCGTAATCAAGTGCCCTTGATCCGTCCACAGTTGGAAAATGCCCAA
GCGCGGGAAACTGGGATCAGTAAGCAAGATCTCGACAATGCCCTATTGGTTAACTTTAGCGGTAAGCAAATTGGTTTATA
CCGAGAAACCAGCCACTTGTTGCCCATCGTCGCCAGAGCGCCCGCCGAAGAGCGTTTGCAGGCCGACAGCCTATGGAAGT
TGCAAATTTGGAGTAGCGAACACAACACCTTTGTGCCTGCCACCCAAGTGGTGAGTAGCTTTAACACTGAGTGGGAAAAC
CCGCTGGTGATGCGCCGAGATCGTATGCGTATGCTCGCTGTGATGGCCGATCCTAAACTTGGCAGTGATGAAACCGCCGA
CTCTGTACTGCGTAAAGTGAAAGACAAGGTCGAAGCGATCAGCCTACCCGCAGGTTATCACTTGGAATGGGGCGGTGAAT
TTGAAACCGCAGGCGAAGCGCAAACCGCGGTATTTAGCTCGATTCCCATGGGTTATCTGGCGATGTTTTTAATCACAGTA
TTCCTGTTCAACTCAGTGCGCCAGCCCTTAGTGATCTGGTTTACTGTGCCCTTGGCCCTGATTGGGGTATCTGCGGGACT
CTTGTTATTCGACGCCCCTTTCAGCTTTATGGCGCTACTCGGCCTGCTGAGTTTGTCGGGTATGGTGATTAAAAACGGTA
TCGTCTTGGTCGATCAAATCAACCTCGAACTCAGTGAAGGCAAACCCGCTTATTTCGCCTTGGTCGACTCCTGTGTCAGC
CGTGTGCGCCCCGTCATGATGGCAGCGATAACCACTATGCTCGGGATGATCCCACTGATCTCAGACGCCTTTTTCGGTTC
AATGGCGATAACGATTATTTTCGGTCTCGGTTTTGCGTCACTGTTAACACTCATAGTACTGCCAGTGATGTACAGCCTAG
TATTCAATATTAAAGCGACGGCGATAGGAGGTGAGTCACCTAACAAATAA

Protein sequence :
MNIAEYSIRHKVISWMFVLLLLVGGGVSFTGLGQLEFPEFTIKEALVITAYPGASPEQVEEEVTLPLEDALQQLDAIKHV
TSINSAGLSQIQIEIKESYDKTTLPQVWDEVRRKVNDTAGILPPGTTAPQVMDDFGDVYGILFNLSGPDYSNRELSNYAD
YLRRELVLVPGVKKVSVAGSVTEQVVIEISQQKLSALGLDQSYIYGLVNNQNVVSNAGSLVIGDNRIRIHPTGEFSNVQD
LARLIVSPLGSTELIYLGDIANIEKDYDETPNVLYHNKGEAALSLGISFSSGVNVVEVGQKVSDRLAELESQRPIGMNLA
TVYNQSQAVDETVNGFLINLLESIAIVIAVLLLFMGLRSGMLMGLILLLTILGTFIVMKVLGIELQLISLGALIIALGML
VDNAIVVTEGILIGLRRGKTRLEAAKQIVAQTQWPLLGATVIAIIAFAPIGLSQNAAGEFCRSLFQVLMISLFISWITAI
TLTPFFCHLLFKDAPSDEEAQDPYKGWFFSLYRASLTLALRFRLVSILLVVAMLFSAVVGFGHIKNVFFPASNTPIFFVD
IWMPEGTDIKATERFTADIERQLLQQNEQKDIGLKHLTSVIGQGSQRFVLPYQPEKGYPAFAQLIVEMQDLAAVKAYMPE
LETLLNQRFPQAQYRLKNMENGPSPAAKIEARFYGDNPEVLRALGAQAEAIFHAEPSMDGIRHNWRNQVPLIRPQLENAQ
ARETGISKQDLDNALLVNFSGKQIGLYRETSHLLPIVARAPAEERLQADSLWKLQIWSSEHNTFVPATQVVSSFNTEWEN
PLVMRRDRMRMLAVMADPKLGSDETADSVLRKVKDKVEAISLPAGYHLEWGGEFETAGEAQTAVFSSIPMGYLAMFLITV
FLFNSVRQPLVIWFTVPLALIGVSAGLLLFDAPFSFMALLGLLSLSGMVIKNGIVLVDQINLELSEGKPAYFALVDSCVS
RVRPVMMAAITTMLGMIPLISDAFFGSMAITIIFGLGFASLLTLIVLPVMYSLVFNIKATAIGGESPNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1355 YP_001217299.1 AcrB/AcrD/AcrF family transporter Not tested VPI-2 Protein 3e-180 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_0640 YP_001364864.1 acriflavin resistance protein BAC0428 Protein 0.0 54
Shew185_0640 YP_001364864.1 acriflavin resistance protein BAC0519 Protein 0.0 54
Shew185_0640 YP_001364864.1 acriflavin resistance protein BAC0526 Protein 0.0 53
Shew185_0640 YP_001364864.1 acriflavin resistance protein BAC0425 Protein 2e-180 42