Gene Information

Name : Shew185_0611 (Shew185_0611)
Accession : YP_001364835.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Unknown
Product : IS66 Orf2 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 731548 - 731892 bp
Length : 345 bp
Strand : -
Note : PFAM: IS66 Orf2 family protein; KEGG: ppr:PBPRB1076 putative ISVme-ORF2

DNA sequence : 
ATGACACCATCTGCTCAAGTTTATCTCGTCACGGGTGTCACAGATATGCGTAAGTCTATCGATGGCCTATCGCTTATCGT
TGCACAACATCTTGAAATGGACCCGTTTAGCGAATCCTGGTTTATTTTTTGTAATCGTCATCGAGATAAACTCAAAATCT
TGTTTTGGGACACTAATGGCTTTTGGCTTTATTATCGGCGGTTAGAAAAAGGCACCTTTAAGTGGCCAAAGCCAACACAC
GATGGCGCACTACATATCAGCAAGGCCCAGCTGAATTGGCTGTTATCGGGGTTATCTATCGAGCATCACAGAGCACATCG
ACCAATAACTAACCTAACAGTGTGA

Protein sequence : 
MTPSAQVYLVTGVTDMRKSIDGLSLIVAQHLEMDPFSESWFIFCNRHRDKLKILFWDTNGFWLYYRRLEKGTFKWPKPTH
DGALHISKAQLNWLLSGLSIEHHRAHRPITNLTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 5e-14 44
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 5e-14 44
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 3e-14 43
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 3e-14 43
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 6e-14 43
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 1e-13 42
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 8e-13 41
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 8e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_0611 YP_001364835.1 IS66 Orf2 family protein VFG1737 Protein 2e-14 43
Shew185_0611 YP_001364835.1 IS66 Orf2 family protein VFG1665 Protein 4e-14 42