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Name : Shew185_0487 (Shew185_0487) Accession : YP_001364718.1 Strain : Shewanella baltica OS185 Genome accession: NC_009665 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 551902 - 553662 bp Length : 1761 bp Strand : + Note : PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: sbl:Sbal_3832 type II secretion system protein E DNA sequence : ATGAAACCCAGATTAAAAATGCGTTTGGGCGATCTGTTAGTTCAAGAAGCCATTATTACTGAAGCGCAGTTGCAACAGGC GTTAGGCGAGCAGCGCAATACGGGCAAAAAACTGGGCCGTACCCTCATTGATCTGCAATCGATTACAGAGCATCAGTTGC TGCAGTTTTTGTCGCAACAATTGAATGTGCCTTTGCTTGATATCAGTAAAATGCCAATCCCTGCGGAAGTCGTGCATCTT ATTCCTGAGGTGCAAGCCCGACGTTTCCGCGCTTTAGCGGTTGAAGACAGGGGCGATAGCGTACTGGTAGCTATGAGTGA TCCAGCCGATTTGCAGGCGCTCGATCACCTCGAAATGCTTATCGCACCTAAGCGTTTGAAGTTAGCTGTAGCGCCCGAGC AGCAACTGCTACAAGCGTTTGATAACTTATATCGCCGTACAGAGCAAATTGCTCAGATCGCCGGTAAGCTCGAAGAAGAA TACGCCGCCGATGAGATGTTCGATTTAGCCAGTCTGACTTCTGGGGACAGTGACAATGAAACTACAGTGGTTAAGCTGCT GCAGTCGATTTTTGAGGATGCGGTGCAAATGCGCGCCTCGGATATCCATATCGAACCCGGTGATAAAGCCCTACGTATTC GCCAGCGTATCGATGGCCAGCTACACGAAACGATTCTGAATGAAGTTAATATTGCCGCAGCTTTAGTATTGCGACTTAAG TTGATGGCTGGACTCGATATTTCTGAAAAACGTTTGCCGCAGGATGGCCGTTTCCACATGGAAATAAAAGGTCATCATAT CGATGTGCGTATGTCGACTATGCCGATTTACCACGGCGAATCTGTGGTAATGCGTTTACTCGACCAATCGGCGGGTTTAT TGACCCTAAACGAAACCGGTATGCCGCCTGCTATTTTGGCGCGTATTCGTAAACAGATTAAACGTCCCCACGGCATGTTG TTGGTCACTGGTCCCACGGGTAGCGGCAAAACGACCACCTTGTACGGTATTTTGAGCGAGCTCAACACCGCCGACCGTAA GATCATCACAGTGGAAGATCCGGTCGAGTATCAATTGCCACGGATAAACCAAGTGCAAGTTAACCATAAGATTGGCTTGA ACTTTTCCAACGTATTGCGCACCACCTTGCGTCAAGACCCCGATATCATCATGGTCGGGGAAATGCGTGATCAAGAAACC GTTGAGATTGGCCTGAGGGGCGCATTAACGGGTCACTTTGTGCTATCGACCTTGCACACTAACGATGCGGTCACCAGTGC GCTGCGTTTGCTCGATATGGGCGCCGCCAGTTATTTAGTTGCCAGTGCCTTAAGGGTGATTATTGCCCAGCGTTTAGTGC GACGTGTTTGTCATAACTGTGGCGTTGAGTATCAGCCGACACCGCAGGAAAAAGCCTGGCTGAGTAGCGTGAGTCGCAAA GATTTTAGCCATGCAAACTTTAGAATCGGTACCGGTTGCCAGAGTTGTAACGGCAGTGGTTATCGTGGCCGTATTGGTAT TTTTGAGATCCTCGAGCTCGACGAAAAGATGATCGATGCGATGCGTACCGGTAATCCGCAGGATTTCGCCAGAGCCGCGT TGCAGAGCCCTAACTTTACCCCGCTCGCCGAGTCAGCGTTGCAATATTTGAGTGAAGGCATGACGACCATTGAAGAGGTG GCTAAGCTGGTAGAGGACGTGAGTGAATCTCAGATACCTTTGTCGAAGGATATTATTAGCCAACAAGGGGTTGAGGCGTA A Protein sequence : MKPRLKMRLGDLLVQEAIITEAQLQQALGEQRNTGKKLGRTLIDLQSITEHQLLQFLSQQLNVPLLDISKMPIPAEVVHL IPEVQARRFRALAVEDRGDSVLVAMSDPADLQALDHLEMLIAPKRLKLAVAPEQQLLQAFDNLYRRTEQIAQIAGKLEEE YAADEMFDLASLTSGDSDNETTVVKLLQSIFEDAVQMRASDIHIEPGDKALRIRQRIDGQLHETILNEVNIAAALVLRLK LMAGLDISEKRLPQDGRFHMEIKGHHIDVRMSTMPIYHGESVVMRLLDQSAGLLTLNETGMPPAILARIRKQIKRPHGML LVTGPTGSGKTTTLYGILSELNTADRKIITVEDPVEYQLPRINQVQVNHKIGLNFSNVLRTTLRQDPDIIMVGEMRDQET VEIGLRGALTGHFVLSTLHTNDAVTSALRLLDMGAASYLVASALRVIIAQRLVRRVCHNCGVEYQPTPQEKAWLSSVSRK DFSHANFRIGTGCQSCNGSGYRGRIGIFEILELDEKMIDAMRTGNPQDFARAALQSPNFTPLAESALQYLSEGMTTIEEV AKLVEDVSESQIPLSKDIISQQGVEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-76 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-76 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shew185_0487 | YP_001364718.1 | type II secretion system protein E | VFG1876 | Protein | 8e-83 | 45 |
| Shew185_0487 | YP_001364718.1 | type II secretion system protein E | VFG2048 | Protein | 6e-76 | 42 |
| Shew185_0487 | YP_001364718.1 | type II secretion system protein E | VFG0182 | Protein | 5e-80 | 41 |
| Shew185_0487 | YP_001364718.1 | type II secretion system protein E | VFG1880 | Protein | 1e-76 | 41 |
