Gene Information

Name : Shew185_0451 (Shew185_0451)
Accession : YP_001364682.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Virulence
Product : response regulator receiver protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 511296 - 511898 bp
Length : 603 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sbl:Sbal_3862 response regulator receiver protein

DNA sequence : 
ATGTCTACAAAATTGCCACTATATTTAGTTGATGACGATGAAGCGATTCTGGATTCGCTGGGTTTTATGCTCGGGCAATT
TGGCTACCAAGTGCAAACCTTCAACAGCGGCCGCGACTTCCTTGCGCACTGTGCATTATCGCAGGCAGGCTGCGTGATTT
TAGATAGCCGAATGCCGGAGATCACCGGCCAAGAAGTGCAGCAAAAACTGCTCGAAACCCACAGTCCGCTTGGCGTCATC
TTTCTCACTGGCCACGGCGACTTACCTATGGCGCTGAGCGCCTTTCGTAAGGGAGCCTGCGACTTTTTTCAAAAACCTGT
GTCCGGCAAGGCATTAGTGCAAGCGATAGAAAAAGCACAGCGTGAAAGCCAGGCGGCCTTCGAGCAGCAAAGTCTGCAAC
ATAAGTTTGACCAACTGACCGAGCGCGAACAGCAAGTGTTAGCCCATGTGATCCAAGGCATGACCAATAAGCAAATCTCG
GAGGCGATGTTTTTATCCCTGCGCACGATTGAAGTACACCGCGCAAAAATCATGAAAAAACTCGAAGTGAATAATATGGC
AGAGCTAGTGCAACACTTAGGCAATCTACATTCTGTTTTATAA

Protein sequence : 
MSTKLPLYLVDDDEAILDSLGFMLGQFGYQVQTFNSGRDFLAHCALSQAGCVILDSRMPEITGQEVQQKLLETHSPLGVI
FLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQRESQAAFEQQSLQHKFDQLTEREQQVLAHVIQGMTNKQIS
EAMFLSLRTIEVHRAKIMKKLEVNNMAELVQHLGNLHSVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 6e-36 44
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 6e-36 44
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 4e-36 44
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 6e-36 44
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 6e-36 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_0451 YP_001364682.1 response regulator receiver protein VFG0488 Protein 2e-36 44