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Name : Shew185_4329 (Shew185_4329) Accession : YP_001368506.1 Strain : Shewanella baltica OS185 Genome accession: NC_009665 Putative virulence/resistance : Virulence Product : NAD-dependent epimerase/dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 5163230 - 5164237 bp Length : 1008 bp Strand : + Note : PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: shw:Sputw3181_0062 NAD-dependent epimerase/dehydratase DNA sequence : ATGAAATACTTAGTCACAGGCGCTGCGGGTTTTATCGGCGCCAAAGTCAGTGAACGCCTTTGCTTGCTTGGCCATGAAGT TATCGGCATTGATAACCTCAATGACTATTACGACGTCAATCTCAAATTGGCACGTTTAGACCTTTTACAAACTTTAAATA ATTTCCATTTTATTAAACTCGATCTCGCAGACAGAGAAGGTATTGCTGCGCTTTTTGCGCTGCATGCATTCCAACGTGTT ATCCATCTTGCGGCTCAAGCAGGTGTGCGTTACTCGCTCGACAATCCGTTAGCCTATGCCGACAGTAATTTAATTGGCCA TCTCACTATTTTAGAAGGATGTCGCCACCATAAAATTGAGCATCTCGTGTATGCTTCATCTTCGTCTGTATATGGATTAA ATCAGAAAATGCCCTTCTCCACTGAAGACAGCATAGATCATCCCATTTCGCTCTATGCCGCCACGAAGAAAGCCAATGAA TTGATGTCGCACACTTACTCACATTTATATCAATTACCGACGACAGGTCTGCGCTTTTTTACCGTCTACGGCCCTTGGGG CCGTCCCGATATGGCTTTATTTAAATTCACCAAAGCCATACTCGCAGGTGAAGTGATCGATGTGTATAACCATGGAGACC TCAGTCGAGACTTTACCTATATTGATGATATTGTTGAGGGAATCATTCGGGTACAAGCCAAACCACCTCGCCCAAATACG GACTGGACAGTAGAAGCTGGCACGCCAGCCACCAGCAGCGCGCCATATCGCGTCTTTAATATTGGCAATGGTAGCCCAGT GCAGTTACTCGACTTTATTACAGCGCTAGAAGATGCCTTAGGCATTAAAGCGAACAAGAACCTGCTACCGATGCAGCCGG GCGATGTGCATTCGACATGGGCCGACACAAACGACCTATTTGATGCCGTTGGCTATAAGCCACTGGTGGATATCAACACT GGCGTCATGCAATTTGTGGACTGGTATCGCCAGTTCTATAACAAATAA Protein sequence : MKYLVTGAAGFIGAKVSERLCLLGHEVIGIDNLNDYYDVNLKLARLDLLQTLNNFHFIKLDLADREGIAALFALHAFQRV IHLAAQAGVRYSLDNPLAYADSNLIGHLTILEGCRHHKIEHLVYASSSSVYGLNQKMPFSTEDSIDHPISLYAATKKANE LMSHTYSHLYQLPTTGLRFFTVYGPWGRPDMALFKFTKAILAGEVIDVYNHGDLSRDFTYIDDIVEGIIRVQAKPPRPNT DWTVEAGTPATSSAPYRVFNIGNGSPVQLLDFITALEDALGIKANKNLLPMQPGDVHSTWADTNDLFDAVGYKPLVDINT GVMQFVDWYRQFYNK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-97 | 58 |
