Gene Information

Name : Shew185_4328 (Shew185_4328)
Accession : YP_001368505.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 5162043 - 5163206 bp
Length : 1164 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: shw:Sputw3181_0063 UDP-glucose/GDP-mannose dehydrogenase

DNA sequence : 
ATGGATATTGTTGTTGTGGGGATGGGCTATGTGGGCCTATCAAATGCCGTCTTATTGGCGCAGCAAAACCAAGTCACTGC
AATTGATTTAGTTCCTGAACGTGTCAAGCAAGTTAACAAGCGTAAATCCACTGTGGTCGATGAATTAATCGAAGACTATC
TGCAAAACAAACCGTTGAATTTAACTGCGACAACGGAAAATGTAGCCTTTCAATCGGCTGACGTTGTGATTATTGCGACT
CCAACAGACTACGATCCTCAGACTAATTATTTTAATACTCATTCGGTTGAAAGCGTCATTCGTGATGTACTCGCAGTTAA
TCCTGATACGACTATTATCATCAAATCGACTGTACCCGTCGGCTTTACCGCTGCATTAAGGCACAAGTTTAAGAGCGACA
ACATACTCTTTTCTCCAGAGTTTTTACGCGAAGGGAAAGCCTTGTATGACAACCTTTATCCCTCACGGATTGTCGTCGGT
GAACGCTCGGCGCGTGCCCAAGTCTTTGCAGACCTTTTAGCCAAGGCGGCAATCAAGCAAGATATTCCTATTTTGCTGAC
CGATAGCACCGAAGCCGAAGCGATTAAGTTATTTGCTAATACATTTCTCGCCATGCGGGTCGCCTACTTTAACGAGCTCG
ATACCTATGCAGAGAGTCGAGGATTAAATACTCGCCAGATTATTGAGGGGGTTAGCCTCGATCCGCGTATTGGTGATTAT
TACAACAATCCTTCTTTTGGCTATGGCGGGTACTGTCTTCCGAAAGACACTAAGCAATTACTGGCTAACTACAATGATGT
CCCAAACAATTTAATCAGTGCCATTGTCGACTCAAACACCACACGCAAAGACTTTATCGCCGACGCTATTATCCGTAAGC
AGCCAAAATGTGTAGGAATTTATCGTTTGATCATGAAAGCCGATTCAGACAATTTCCGCGCCTCAGCAGTGCAAGGCGTG
ATGAAGCGCATTAAAGCGAAAGGCATTGAAGTCGTCGTGTTTGAGCCTGTACTTAAAGAAGATTACTTTTTCAAATCTCG
CGTGATGAGAGACTTAACTGAATTTAAGTCAATATGTGATGTGATCGTCTCCAACCGTATGGTTGATGAACTCAATGATG
TTGCGGATAAAGTCTATACCCGAGATCTATTTCACCATGATTAA

Protein sequence : 
MDIVVVGMGYVGLSNAVLLAQQNQVTAIDLVPERVKQVNKRKSTVVDELIEDYLQNKPLNLTATTENVAFQSADVVIIAT
PTDYDPQTNYFNTHSVESVIRDVLAVNPDTTIIIKSTVPVGFTAALRHKFKSDNILFSPEFLREGKALYDNLYPSRIVVG
ERSARAQVFADLLAKAAIKQDIPILLTDSTEAEAIKLFANTFLAMRVAYFNELDTYAESRGLNTRQIIEGVSLDPRIGDY
YNNPSFGYGGYCLPKDTKQLLANYNDVPNNLISAIVDSNTTRKDFIADAIIRKQPKCVGIYRLIMKADSDNFRASAVQGV
MKRIKAKGIEVVVFEPVLKEDYFFKSRVMRDLTEFKSICDVIVSNRMVDELNDVADKVYTRDLFHHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-91 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_4328 YP_001368505.1 UDP-glucose/GDP-mannose dehydrogenase VFG0963 Protein 4e-101 56