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Name : Shew185_4316 (Shew185_4316) Accession : YP_001368493.1 Strain : Shewanella baltica OS185 Genome accession: NC_009665 Putative virulence/resistance : Virulence Product : Fis family two component sigma54 specific transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 5149888 - 5151270 bp Length : 1383 bp Strand : - Note : PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sbl:Sbal_0083 two component, sigma54 specific, transcri DNA sequence : ATGAGCCAGATAGATAATAACCTCAAGCCTCTTCCATCGGCAGTATCGGTATTGATTGTTGATGATGAACCCGGAATGCG CAGCTTTTTAAATAAGGCACTCTCGAAGAAATTCGCCTTAGTCGAAACAGCAGGCAGTATCGAAGATGCGGAGCAGCTAC GTAGCCGCTGCCATTTCGATTTGCTGATCGTCGACATTCGCCTGCCAGGCCGCTCAGGTATCGAATGGCACGAAGCGCTA GATGAGCAGGGTCGTCGTTCTGACATCATTTTTATGACCGGCTATGCTGACATGGAAGTGGCGATTACTGCGCTGCGCGC GGGTGCATCTGACTTCATCATGAAACCTTTCCACCTTGAGCAGATGATGACAGCGGTCGATCGTTGTATCGAACGTCGCC TGCTTAAACGTGAAAACTTGATGCTGCGCCGTGAGGTTTCAATCGGTTACTCATCGACCATTATTGGCAGCAGTGAGGCC ATGAAGTCGGTGAAACATATTATCGAACGTGTGGCGCCGACCAATGCCGTTGTGCTGATCCAAGGTGAGTCGGGTACGGG TAAGGAATTAGTTGCACGCCAATTGCATTTGCTCAGTGGACGTCAGGGACCTTTTGTCCCTGTCAACTGTGGCTCTATCG CTCCTGAATTGCTTGAAAGTGAACTGTTTGGTCATACCGCTGGCGCATTTACGGGTGCGAAAGGCAATCGTGAAGGTTTA TTCAGTTTTGCCTCGGGCGGGACGATTTTCCTCGATGAAATTGGCGAAATGCCACTGAAAATGCAAACGGCATTGCTTAG AGTATTAGAGCAAAAAGCGATTCGCCCTGTGGGCAGCGAGAAAGAAGTGAACATCGATGTGCGAGTGATCGCGGCAACCA ACCGCACTTTGATTGATGAAGTGGATGCGGGAAATTTCCGCCGTGACTTATATTATCGACTGAATGTGCTCGATATTTTA ATCCCGCCATTACGTGACAGACCCGAAGATGTGGTCGAGTTAACCCATCACTTCACCCGTCAACTCGCCGCCGAATTAGG GGTTAGAGAAGTCGTGTGGAGCCATGAGGACATGGTGAAGTTGCAACAACACGAGTGGCCAGGCAATATTCGCGAGCTGC GCAATATGATTGAGCGCTGTATTTTGCTGGGTAAACCACCGGCGGAATATTGGAAACAACAGCTAAAGAGTGAGTCTTTA TCGACATCGGGTTATCCATTGGATTGGCCATTAAAAGAAGTCGAAAAACACCATGTGACCAGCGTTGTGGACTTACATTC TGGCAATAAGTCTGCCGCGGCGAGGGATTTAGGCGTTTCGCGTAAGACCTTAGATCGTAAGTATAAAGAGTGGTTTGATT TTAGCGGCGATCAGGAGTCATAG Protein sequence : MSQIDNNLKPLPSAVSVLIVDDEPGMRSFLNKALSKKFALVETAGSIEDAEQLRSRCHFDLLIVDIRLPGRSGIEWHEAL DEQGRRSDIIFMTGYADMEVAITALRAGASDFIMKPFHLEQMMTAVDRCIERRLLKRENLMLRREVSIGYSSTIIGSSEA MKSVKHIIERVAPTNAVVLIQGESGTGKELVARQLHLLSGRQGPFVPVNCGSIAPELLESELFGHTAGAFTGAKGNREGL FSFASGGTIFLDEIGEMPLKMQTALLRVLEQKAIRPVGSEKEVNIDVRVIAATNRTLIDEVDAGNFRRDLYYRLNVLDIL IPPLRDRPEDVVELTHHFTRQLAAELGVREVVWSHEDMVKLQQHEWPGNIRELRNMIERCILLGKPPAEYWKQQLKSESL STSGYPLDWPLKEVEKHHVTSVVDLHSGNKSAAARDLGVSRKTLDRKYKEWFDFSGDQES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 4e-62 | 41 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 4e-62 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shew185_4316 | YP_001368493.1 | Fis family two component sigma54 specific transcriptional regulator | BAC0089 | Protein | 2e-67 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shew185_4316 | YP_001368493.1 | Fis family two component sigma54 specific transcriptional regulator | VFG1214 | Protein | 1e-67 | 42 |
