Gene Information

Name : Shew185_4273 (Shew185_4273)
Accession : YP_001368451.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Unknown
Product : type III restriction protein res subunit
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 5094864 - 5096279 bp
Length : 1416 bp
Strand : +
Note : PFAM: type III restriction protein res subunit; KEGG: spc:Sputcn32_3839 type III restriction enzyme, res subunit

DNA sequence :
ATGCAACTTAGACAATGGCAATCAGAGTGTGTCAAACGCGCTCTAAGACACTTTCACGGTGCACATAGACACTTTCTTTG
TTTAGCAACGCCTGGGGCTGGAAAATCGATTATGGCAGCCGAAGTTGCTGCGAAATTATTTGAAGATGATTTAATCGACT
TTGTACTGTGCTTCTCCCCGTCAGTGAATATATCTCAAGGGATGAAACAAACCTTTTCAAGTCGTCTAAGCTGCCGGTTT
GATGGCGTGATAGGTTCAGTTGGTTGCTCTTATACTTACCAAGGGATGTTGGCCTTTAAAGAAGACTTTTGGCAACTGCT
AAAAAGAAATCGAGTACTCGTGATCTTTGATGAAATTCATCATTGCGCAGGGAGCTCTCTAGAAGATGCGAACGCATGGG
GGGAAGAGATTCTACTCAACATACAAGATCAAGCGCAGTACACACTAGCGTTAACTGGTACGCCTTGGCGCTCAGATCAA
GCACCGATTGTTTTATCTCGATATACCGACCCTGATAATCAAATTCAATGTGACTATGTGTATGGCCTGAAGGAAGCTGT
TGCCGACGGTGTATGTCGTAGCCCCCGCATTGTACTTATTGATAATGACAAAATTTTAGTTACTGACGAAGAAAACGAAA
CAAAGACATACAGTTGTTTAGATGACTTATTTAAATGCTCATCGGTTTCGTACCAGTCGATCATCAAAAATCATGAAGCA
ATTCGACATACTTTAGCGCTAGCAACGGACAAACTTGGAATGATAAAACAGTCCAATCCTAATGCTGCCGGACTCATCGT
CGCTTCATCAATATCGCACGCCGCATATATCTTTAATATGCTAAAAACAGATTTTAGTGAAACAACTCAGATAGTTACCT
ACAAAGAAGATGACCCCTCACTTAAGATAAATGAATTTAGAAATAGTACGACTAATTGGATCGTCAGTGTAGGCATGATA
AGTGAAGGGACTGACATCCCTCGTCTACAGGTCTGCTGCCACCTTAGCCGAGTAAAAACCGAGCTCTACTTTAGGCAGGT
TTTAGGTCGTATTTTACGTACGAATGATTCGACGAACCAACAAGCTTGGCTATACACCTTTGCAGAGCCAAAACTTGTCG
AATTTGCCAACCGTATAGCAGAAGAAATACCTGATATACCTGTGTTATTTAGAGAGCCAATCGAGATAAATCTCAAACGC
GAGCAACCCGAAACCCATGATATGACAGTGAAAACAATGCCACCTACTAACAGCAATATTCTGAATATTGGCAGGCAATA
CCTCGCTAAACAGACACAATCGTATTCTGTAGAGCTTTTATCAAGGGAATTTTTAGGTACTCCAGCATCGTTATCATTTG
AGCTTTTAGGTGGTTTTAGAGAAAAAGTTGTCTCAACTTTTGACTCACCGTTTTAA

Protein sequence :
MQLRQWQSECVKRALRHFHGAHRHFLCLATPGAGKSIMAAEVAAKLFEDDLIDFVLCFSPSVNISQGMKQTFSSRLSCRF
DGVIGSVGCSYTYQGMLAFKEDFWQLLKRNRVLVIFDEIHHCAGSSLEDANAWGEEILLNIQDQAQYTLALTGTPWRSDQ
APIVLSRYTDPDNQIQCDYVYGLKEAVADGVCRSPRIVLIDNDKILVTDEENETKTYSCLDDLFKCSSVSYQSIIKNHEA
IRHTLALATDKLGMIKQSNPNAAGLIVASSISHAAYIFNMLKTDFSETTQIVTYKEDDPSLKINEFRNSTTNWIVSVGMI
SEGTDIPRLQVCCHLSRVKTELYFRQVLGRILRTNDSTNQQAWLYTFAEPKLVEFANRIAEEIPDIPVLFREPIEINLKR
EQPETHDMTVKTMPPTNSNILNIGRQYLAKQTQSYSVELLSREFLGTPASLSFELLGGFREKVVSTFDSPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13515.1 type III restriction enzyme Not tested PAGI-7 Protein 1e-103 52