|
Name : rph (Shew185_0369) Accession : YP_001364601.1 Strain : Shewanella baltica OS185 Genome accession: NC_009665 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 413503 - 414216 bp Length : 714 bp Strand : + Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGTCCAAGTAACAGAACGCCAGCACAAACTCGTCCCATCACTATCACTCGCCAGTTTACGGCCCATGCCGAAGGTTC TGTGTTAGTGGAATTTGGCGAAACGAAAGTGCTTTGTACCGCCAGTTTTACTGAAGGTGTGCCACGTTTCCTTAAAGGTC AGGGTCAAGGCTGGGTGACGGCGGAATACGGCATGTTGCCACGTTCGACCCATAGCCGTATGGATCGTGAAGCCGCTCGC GGTAAGCAATCTGGCCGTACGCAAGAAATTCAACGTCTTATCGGCCGTGCTCTGCGCGCTTGTGTAGATATGAAAGCCCT AGGCGAAAACACTATCGTGATCGACTGTGATGTGATCCAAGCTGACGGTGGCACGCGCACTGCCTCTATCACTGGCGCCT GTGTGGCCTTAGTGGATGCGTTGAACTGGGCGCGTGGTAAAGGCATCATTAAATCTAACCCGCTGAAATTCCTTATCGCT GCTGTCAGCGTCGGTATTTACAAGGGTGAAGCGATCAGCGATCTAGAATATATCGAAGACAGCGCCGCTGAAACTGACAT GAACGTGGTGATGACGGAAACGGGAAAGATCATCGAAATTCAAGGCACCGCCGAAGGCGAGCCATTCAGCCATGAAGAAT TACTCGAACTGTTGGCATTGGCGAAGAACAGTATTCGTGAAATCGTCGATGTGCAGAAAGCCGCACTGAACTAA Protein sequence : MRPSNRTPAQTRPITITRQFTAHAEGSVLVEFGETKVLCTASFTEGVPRFLKGQGQGWVTAEYGMLPRSTHSRMDREAAR GKQSGRTQEIQRLIGRALRACVDMKALGENTIVIDCDVIQADGGTRTASITGACVALVDALNWARGKGIIKSNPLKFLIA AVSVGIYKGEAISDLEYIEDSAAETDMNVVMTETGKIIEIQGTAEGEPFSHEELLELLALAKNSIREIVDVQKAALN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-60 | 58 |
