Gene Information

Name : Shew185_3732 (Shew185_3732)
Accession : YP_001367919.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Virulence
Product : response regulator receiver protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 4433378 - 4433998 bp
Length : 621 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sbl:Sbal_0593 response regulator receiver protein

DNA sequence : 
ATGAGTCTTGAGTTACCAGTGTATTTAATCGATGACGATGACTCAGTGCGTCGTTCTTTGCGTTTTATGCTCGAAAGTTA
TGGCCTCAAGATCACTGACTTTGATAGTGCCGAAGCCTTTTTTACTACCGTGGACTTAACCCTGCCGGGTTGTGCACTGG
TCGATGTGCGTATGCCGGGCTTGAGTGGCCCGCAGTTGCATCTCGAATTAGTCGCCAAAAATAGTCCGTTAGCTGTGATT
TATTTGACCGGCCATGGCGATGTGCCTATGGCGGTTGAAGCGCTCAAACTCGGTGCGGTGGATTTTTTCCAAAAGCCCGC
CGATGGCGCTAAGTTAGCCGAAGCGGTCGTCAAAGCGTTGGAACATACCAAGGCACATCATCAAGACAATCAGTATCTTG
AGACGTATCAAGCGCTCACACCAAGGGAGCGGGAGATACTCAACCTGATTGCCCAAGGGTTGAAGAACCAAGAGATCGCC
GATAGCCTCTGTATTGCCATGCGCACGGTCGAGATCCACCGCGCCAATTTGATGAAAGGCATGCAAGTGGGATCGCTGGC
GGAAATGATGCTGATTTATAGCCGGATCGCCGATCGCCTGCGCCTTGAAGATAACCGCTAA

Protein sequence : 
MSLELPVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTTVDLTLPGCALVDVRMPGLSGPQLHLELVAKNSPLAVI
YLTGHGDVPMAVEALKLGAVDFFQKPADGAKLAEAVVKALEHTKAHHQDNQYLETYQALTPREREILNLIAQGLKNQEIA
DSLCIAMRTVEIHRANLMKGMQVGSLAEMMLIYSRIADRLRLEDNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 4e-33 45
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 6e-33 45
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 6e-33 45
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 6e-33 45
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 6e-33 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_3732 YP_001367919.1 response regulator receiver protein VFG0488 Protein 2e-33 45