Gene Information

Name : Shew185_3070 (Shew185_3070)
Accession : YP_001367264.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 3660986 - 3661939 bp
Length : 954 bp
Strand : -
Note : PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: sbl:Sbal_3056 protein of unknown function DUF1722

DNA sequence :
ATGTACAAGTTTAACCCGCAGCGAATTCAGATTGGGATCAGTGCTTGCTTATTAGGGGAGAAGGTTCGTTTTGATGGCGG
ACATAAAAATTCTACCTATTGTAATCAAGAGATTAAGCAATTTTTCGATTATGTGCCTATCTGTCCAGAAATGGCGATTG
GCCTAGGTGCACCCCGTAAAAGTATCCGTTTAGTCCGTGATGGTGAAATCATCTTAGTGCAGAGCGGTGACGGTAGCTTA
GATGTGACCGATAAGCTCAATGAATACAGCGAAAACAAGGTTGAAGAGCTTGATTTCCTCGGCGGATACTTGCTTTGCGC
TAAGTCGCCAACCTGCGGCATGGAGCGGGTGACAGAGTACAAAATTGGCACTAACAATGGCTCTAAGTCGGGGATTGGTG
TGTTCGCCCGCAAGTTGATGGAGCGATATCCACTATTGCCTGTGGAAGAAGAAGGCCGCTTGCATGACATGGTGCTACGG
GAGAACTTTTTCACCCGCGTTTATGCCTATCACGATTGGCACCTGATGAAGCATGAAGGGCTGACTAAGCATAAGTTAGT
GAAGTTTCATTCCCGCTATAAATATTTATTAATGGCGCATAGCCCTACATGGTATCGCGAGCTTGGGCCGATAGTGGCCA
ATATTGAGGATCTTGAACAAAGCGCAACCCGCTACTTTGAAGGCTTTATGACGGCCCTCAAAATCAATGCGACCCGTAAA
AATCATACCAGTACGCTGCAGCATATTCAGGGCTACTTTAAAAAGCATTTGAGCAAAGAGCAAAAGACAGAACTGTCTGA
AGCGATTATGAAATATCGCGAAGGTTTATTGCCTCTGTTAGTGCCTATCACGCTTATCAACCATTATCTGCGGGAATTCC
CAACGCCTTACATAGAAGAGCAAGTGTATTTGAATCCCCATCCAGAGGCGTTGAAGCTGCGCTATGCCTACTAG

Protein sequence :
MYKFNPQRIQIGISACLLGEKVRFDGGHKNSTYCNQEIKQFFDYVPICPEMAIGLGAPRKSIRLVRDGEIILVQSGDGSL
DVTDKLNEYSENKVEELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGSKSGIGVFARKLMERYPLLPVEEEGRLHDMVLR
ENFFTRVYAYHDWHLMKHEGLTKHKLVKFHSRYKYLLMAHSPTWYRELGPIVANIEDLEQSATRYFEGFMTALKINATRK
NHTSTLQHIQGYFKKHLSKEQKTELSEAIMKYREGLLPLLVPITLINHYLREFPTPYIEEQVYLNPHPEALKLRYAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 2e-71 47
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 2e-71 47
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 2e-71 47
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 1e-71 47
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 1e-71 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_3070 YP_001367264.1 hypothetical protein VFG0490 Protein 8e-72 47