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Name : fliP (Shew185_2926) Accession : YP_001367123.1 Strain : Shewanella baltica OS185 Genome accession: NC_009665 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : 3.1.1.3 Position : 3509516 - 3510262 bp Length : 747 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGACAACACGTATCCTCGCGTTAGTTGGCTTAGTTATTCTGTTATGTATGCCGTCGGCCTGGGCTGCCGACGGTGTTTT GCCTGCGGTTACCGTAACAACAGGACCTGACGGTTCAACAGAATACTCGGTCACAATGCAGATTTTACTGTTGATGACAT CGCTGAGTTTTTTACCTGCGATGCTCATTATGTTGACCTCTTTCACACGGATCATCATCGTTCTGTCAATATTACGTCAA GCCATTGGGTTACAACAGACGCCGTCTAATCAAGTCTTAATTGGTATGAGTTTATTCATGACCTTCTTTATTATGGCGCC GGTGTTTGACCGGATTTATGACGAAGGGGTTAAGCCTTACATAGAAGAGCAGTTAACCTTGCAGCAAGCGTTTGAAAAAG GCAAAGAGCCACTCAAAGGTTTTATGTTGGGGCAAGTCAGGACCACTGACTTAAAAACTTTTATCGAAATTTCAGGCTAT AAGAACATTAAGTCGCCCGAAGAAGCTCCGATGAGTGTGCTGATCCCCGCCTTTATTACCAGCGAGTTGAAAACAGCTTT TCAAATTGGCTTTATGTTGTTCGTGCCATTTTTAGTGTTAGATCTTGTGGTGGCCAGTATCTTAATGGCCATGGGTATGA TGATGTTATCTCCTATGATAGTGTCGCTACCGTTTAAGATTATGCTGTTTGTGCTCGTCGATGGTTGGAGCTTAGTCCTA GGGACATTAGCGAATAGTTTCGGGTAG Protein sequence : MTTRILALVGLVILLCMPSAWAADGVLPAVTVTTGPDGSTEYSVTMQILLLMTSLSFLPAMLIMLTSFTRIIIVLSILRQ AIGLQQTPSNQVLIGMSLFMTFFIMAPVFDRIYDEGVKPYIEEQLTLQQAFEKGKEPLKGFMLGQVRTTDLKTFIEISGY KNIKSPEEAPMSVLIPAFITSELKTAFQIGFMLFVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWSLVL GTLANSFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 1e-13 | 42 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 1e-13 | 42 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 1e-13 | 42 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 2e-15 | 41 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 1e-16 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 9e-15 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 9e-15 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 6e-15 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 6e-15 | 41 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-14 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001367123.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 1e-56 | 65 |
| fliP | YP_001367123.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 3e-51 | 63 |
| fliP | YP_001367123.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 7e-53 | 61 |
| fliP | YP_001367123.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 5e-47 | 53 |
| fliP | YP_001367123.1 | flagellar biosynthesis protein FliP | VFG0827 | Protein | 4e-15 | 41 |
