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Name : Shew185_2828 (Shew185_2828) Accession : YP_001367025.1 Strain : Shewanella baltica OS185 Genome accession: NC_009665 Putative virulence/resistance : Virulence Product : Fis family two component sigma54 specific transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 3391081 - 3392460 bp Length : 1380 bp Strand : + Note : PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sbl:Sbal_2810 two component, sigma54 specific, transcri DNA sequence : ATGAGTGTGCCCAATTCCATCCAAGATTATTCTGTTCTCATCATCGACGATGAGCCGCACATAGGCACAGTTCTCGTTCA GCTATTTGAACTTGAGGGCATTAAGGCGCTCGCCACCACAGAGCCTAAAGGGATTGCTAAACTCCTGCATAAGGATTGGG CGGGAATGGTGATATCGGATGTCAACATGCCGCAATTAGATGGCATCAGCTTAATGCAACAAATCCGCCTGCAGGACCCC GACCTCCCCGTTGTGTTATTGACAGGTTTTGGGGATATCGCCATGGCAGTCAATGCCCTAAAGCAAGGCGCCTACGACTT TCTCGAAAAACCCTTTAATAACGAGCATATACTCGATGTGGTCAAGCGCGCCTTAGATAAACGCGGCCTGACCCTAGAGA ACCGTAAGCTTAAAAAGGATCTCGAAAGTCAGAGCGTACCGGGCCCTCGCATTTTGGGTAACAGCGTCGGCATCAACCGT ATGCGCCACATCATAGATCAAGTGATAGACACCCCAGCTGATGTGTTAATCGAAGGCGAAACGGGCACAGGTAAAGAGCT CGTCGCCCGCTATTTACACGATCACAGCAGCCGCAGCCAAGCCAACTTTGTCGCTATCAACTGTGGTGCGATCCCCGAGA ACTTAATTGAAAGTGAGCTCTTTGGCGCCGAAGCAGGTGCCTTTACCGGTGTCGATAAGATGCGCATTGGTAAGTTTGAA TACGCCAACGGCGGCACATTATTTTTAGATGAAATTGAAAGTACGCCACTGTCGCTGCAAGTAAAGCTGCTGCGGGTACT TGAAGATCGTAAAGTTGAACGCTTAGGATCAAACAAAAGCATCAGCCTTGATATACGGGTAATTGCCGCCACTAAAGTAG ATTTAAAAAGCCTGTGTGACACGGGGGAGTTTCGCCAAGACTTGTTGTATCGCTTAAATCTGGTGACTGTGCCTATCCCT CCCCTGCGGGATCGCCGTGAAGATATTCCTTTGCTGTTCCTGCACTTTGCCCGCGTCGCATCGGCACGCTATCACAAAGC GCTTATTGCCTTAAATGCCGAGCAAAACGCCATACTCACTTCCCACGACTGGCCGGGCAATGTGCGTGAGTTACGTAATC TCGCCGAACGCTTTGTACTGCTGGGCGGAGAAGCCGCCTTTGCTGGCACTTTGGGCAATACCCCAAGCCTGCACTCGAGC ATGTCATTACTGCAACGAGTCGAGTTTTTTGAAAGGGTACTGATTGAAGAAGCGCTCAGCCACAACAAGGGCAGCATTAA GCAAACAATGGAACAGTTGGAACTGCCCCGCAAAACCCTCTACGACAAAATGCGTAAATATGATTTAGACCGCAAGCAGT ACATTAATTCCGATGACTAG Protein sequence : MSVPNSIQDYSVLIIDDEPHIGTVLVQLFELEGIKALATTEPKGIAKLLHKDWAGMVISDVNMPQLDGISLMQQIRLQDP DLPVVLLTGFGDIAMAVNALKQGAYDFLEKPFNNEHILDVVKRALDKRGLTLENRKLKKDLESQSVPGPRILGNSVGINR MRHIIDQVIDTPADVLIEGETGTGKELVARYLHDHSSRSQANFVAINCGAIPENLIESELFGAEAGAFTGVDKMRIGKFE YANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSISLDIRVIAATKVDLKSLCDTGEFRQDLLYRLNLVTVPIP PLRDRREDIPLLFLHFARVASARYHKALIALNAEQNAILTSHDWPGNVRELRNLAERFVLLGGEAAFAGTLGNTPSLHSS MSLLQRVEFFERVLIEEALSHNKGSIKQTMEQLELPRKTLYDKMRKYDLDRKQYINSDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAC34753.1 | HrpS | Virulence | Hrp PAI | Protein | 2e-50 | 41 |
| hrpS | NP_791207.1 | type III transcriptional regulator HrpS | Virulence | Hrp PAI | Protein | 2e-52 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shew185_2828 | YP_001367025.1 | Fis family two component sigma54 specific transcriptional regulator | BAC0467 | Protein | 5e-68 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shew185_2828 | YP_001367025.1 | Fis family two component sigma54 specific transcriptional regulator | VFG1249 | Protein | 4e-63 | 42 |
