Gene Information

Name : Shew185_2708 (Shew185_2708)
Accession : YP_001366905.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 3243505 - 3244245 bp
Length : 741 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_2687 ABC transporter related

DNA sequence : 
ATGTCTAACGTCATCTTAAAAAACAGTGCCATCAATGTTGTTAACCTCGAAAAATCAGTGACTACTCAGGAAGGAACGCT
CACTATCCTCAAGGGCATTAACTTAGATGTCAAGCAAGGTGAGAGTGTGGCTATTCTTGGCCCGTCGGGTTCGGGTAAGT
CTACCCTGCTCGGGCTGCTTGCGGCGCTTGATACGCCTACCTCTGGCGAAATTTGGCTCGATGGTGTGGCGTTATCCCCA
CTGAATGAAGAGCAAAAAGCCGCGCTGCGTAAACAGAAGGTCAGCTTTATTTTTCAATCATTTATGTTAGTGGATACCTT
AACTGCGCTGGAGAACGTTATGTTACCCGCCGAGCTTGCGGGCGTGAGTAATGCTAAGGAAAAAGCCCAAGCCATGCTGG
TGCGGGTCGGTTTATCCCATCGTTTGACCCATTTACCCAAACAATTATCGGGCGGAGAACAGCAAAGGGTGGCGATTGCC
CGTGCCTTTATTTGTGAGCCCACAGTGCTGTTTGCCGATGAACCCACGGGTAACTTGGACAGCGTCAACGGCCATAAAAT
TGCCGATATGTTGTTTGAACTGAATCAAGAAAGCCACACCACTCTTATCCTCGTCACCCACGATTTACTGCTGGCTAAGC
GTTGCGAGCGGCAGCTGGTTATGGATAACGGCCATTTACAGGAAGATACGGCGCGCGCAGCACCGCTCGCCGATGCTAAG
GAGGCTTTACAATGGAGTTAA

Protein sequence : 
MSNVILKNSAINVVNLEKSVTTQEGTLTILKGINLDVKQGESVAILGPSGSGKSTLLGLLAALDTPTSGEIWLDGVALSP
LNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELAGVSNAKEKAQAMLVRVGLSHRLTHLPKQLSGGEQQRVAIA
RAFICEPTVLFADEPTGNLDSVNGHKIADMLFELNQESHTTLILVTHDLLLAKRCERQLVMDNGHLQEDTARAAPLADAK
EALQWS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-25 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_2708 YP_001366905.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-33 48
Shew185_2708 YP_001366905.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-32 45