|
Name : Shew185_0250 (Shew185_0250) Accession : YP_001364484.1 Strain : Shewanella baltica OS185 Genome accession: NC_009665 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : 1.11.1.6 Position : 288810 - 290330 bp Length : 1521 bp Strand : + Note : PFAM: Catalase domain protein; KEGG: vco:VC0395_A1188 catalase DNA sequence : ATGCATCTGACTAAAAGCCTTTTAATTATTTCTATGGGTCTGGCATTAAATGTACAGGCTCAAACTTTACCAACAAATAC CCTGACACGTGACAATGGCGCCCCTGTGGGTGATAACCAAAACTCGACCACAGCGGGCAGTAATGGCAGCGTGTTATTGC AAGATGTGCAGCTTATTCAGAAGCTACAACGCTTTGCCCGTGAACGTATTCCTGAGCGGGTTGTTCACGCCAGAGGCACA GGTGTGCACGGTGAGTTTGTATCGAGTGGTGATTTTAGTTATCTGACTCAAGCGGCACCCTTTGCACAGAAAGGCAAAGT TACGCCTGTGTTTGTGCGTTTTTCTACTGTTATCCACTCGAAAGGTTCGCCAGAAACGCTGCGCGACCCCCGTGGATTTG CGACCAAATTTTATTCGGACCAAGGTAACTGGGACTTAGTGGGTAATAACTTACCCATATTCTTTATTCGCGATGCGATC AAGTTTCCTGACATGGTGCATTCGCTCAAACCATCGCCTGTGACCAATATGCAAGATCCGAATCGTTTTTTCGATTTTTT TAGCCACGAAGCGGGCTCGACCCATATGTTGACTCAGGTTTACAGTAACTTAGGTGTACCTGCCAGTTATCGTGAAATGG ACGGTTGGGGCGTGCATGCTTACAAGTTTATTAACCAAGACAAGCAAGTGAAATACGTTAAGTTTCACTGGAAGAGTCAG CAAGGTGTAAAAGGCTTGCGCCCTGATGAAGTGGTTAAGGTACAAGGTCAAAACTTTAATCATTTGACCGATGATCTCTA TGGCGAGATCAATAAAGGTAATTTCCCTAAATGGGATTTATACGTCCAATTACTCGACCCAAGTGAGCTGAATAAGTTTG ATTACAACCCGTTAGATGCCACTAAAGTATGGCCAAATGTGCCTGAACAAAAAGTCGGTACTATGACGCTTAATCGCATG CCAGCAAACTTCTTTCAAGAAACTGAGCAAGCGGCATTTGCGCCATCGAATTTGATCCCTGGGATTGAGCCTTCGGAAGA CAGATTATTGCAAGGTCGTATGTTCTCCTACGCCGATACTCAGCTGTATCGACTCGGCGCGAATTTGTCGCAATTGCCGA TTAATAAACCCTTAGTGACGGTGGCAAACCACAACCAAGAAGGCGCGGGCAATATGGGGCATACCCAGTCCGAGGTGAAT TATCAACCGAGCGTACATTTAGCCTTGGCCGAAGATAATCGTTATCGTGCGGTAACGACTGCGCTCAGTGGCACAGTGCA ACAAACGGCTATTAGCAAGCAGGATAACTTTAGCCAAGCGGGCGTTTTTTACCGCAGCTTGAGCAAGCAAGATAGAGCCG ATTTGATCACTAACTTGGCCGGTGACTTAGGCAAAGTGAACGATGCTAAGGTGAAACATCAAATGCTGAGTCACTTTTAT CGTGCAGACCCAGAGTTTGGTGAGCGCTTAATCAAGGCCGTAAAAGGTGATTTGGCCGACGTTAAACAGCGTTCAATTTA A Protein sequence : MHLTKSLLIISMGLALNVQAQTLPTNTLTRDNGAPVGDNQNSTTAGSNGSVLLQDVQLIQKLQRFARERIPERVVHARGT GVHGEFVSSGDFSYLTQAAPFAQKGKVTPVFVRFSTVIHSKGSPETLRDPRGFATKFYSDQGNWDLVGNNLPIFFIRDAI KFPDMVHSLKPSPVTNMQDPNRFFDFFSHEAGSTHMLTQVYSNLGVPASYREMDGWGVHAYKFINQDKQVKYVKFHWKSQ QGVKGLRPDEVVKVQGQNFNHLTDDLYGEINKGNFPKWDLYVQLLDPSELNKFDYNPLDATKVWPNVPEQKVGTMTLNRM PANFFQETEQAAFAPSNLIPGIEPSEDRLLQGRMFSYADTQLYRLGANLSQLPINKPLVTVANHNQEGAGNMGHTQSEVN YQPSVHLALAEDNRYRAVTTALSGTVQQTAISKQDNFSQAGVFYRSLSKQDRADLITNLAGDLGKVNDAKVKHQMLSHFY RADPEFGERLIKAVKGDLADVKQRSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 4e-66 | 45 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 4e-66 | 45 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 4e-66 | 45 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 4e-66 | 45 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 8e-69 | 44 |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 3e-86 | 41 |
