Gene Information

Name : Shew185_0248 (Shew185_0248)
Accession : YP_001364482.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 284865 - 286385 bp
Length : 1521 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: sbl:Sbal_0248 aldehyde dehydrogenase (NAD(+))

DNA sequence :
ATGATTTATGCTCAACCCGGAACCGCAGGCGCAATCGTTAACTTCAAAGAAAAATACGCCAACTTCATCGGCGGTAAATG
GGTCGCCCCAGTCAATGGCAAATACTTCGACAATCGCTCCCCCGTAAATGGCCAAAACTTTTGCCAAATCCCGCGATCCG
ATGCACAAGATATTGAATTAGCGTTAGATGCTGCCCACGCAGCCAAAGAAGCATGGGGCAAAACTTCAGTCACCGAACGC
TCAAACCTGTTACTGCGCATTGCCGATCGGGTCGAACAAAATCTCGAATATTTAGCCGTCGCCGAAACCTGGGAAAACGG
TAAAGCGGTGCGTGAAACCTTAAACGCCGACTTGCCCTTATTTGTCGATCACTTCCGCTACTTTGCCGGTTGTATCCGCG
CACAGGAAGGCAGCGCCGCCGATATCGACGGCAACACAGTCAGCTATCACTTCCCAGAACCTTTGGGAGTAGTCGGCCAG
ATCATTCCTTGGAACTTCCCGCTCTTGATGGCGGCATGGAAAATCGCTCCTGCGCTGGCGGCGGGTAACTGTGTGGTACT
CAAGCCTGCGGAGCAAACGCCGGTATCGATTCTGGTATTACTCGAGCTGATTGAAGACCTATTACCCGCGGGCATTCTTA
ACGTAGTCAACGGCTTTGGCGCCGAAGCAGGACAAGCACTGGCCACCAGCAAACGCATCGCTAAGCTTGCGTTTACGGGC
TCCACCGAAATTGGCTATCACATTTTAAAATGCGCCGCCGAATCCTTAATTCCATCGACCGTTGAGCTTGGCGGCAAATC
GCCTAACGTGTTTTTTGCCGATGTAATGGACCATGAAGACGAATATTTAAATAAGGCCGTCGAAGGCATGTTACTCGCCT
TCTTTAACCAAGGAGAAGTCTGTACTTGCCCATCACGGGTGCTAGTCCAAGAGTCGATTTTCGATCGCTTTATCGAAAAA
GTGCTCGCCCGCGCGCAAACCATTAAGCAAGGCGATCCCTTAGATACCGACACTCAAGTAGGTGCTCAAGCCTCTAAAGA
ACAGTTCGATAAAATCTTAAGCTACTTAGCCATAGGTAAGGCTGAAGGTGCAGAAGTGCTACTGGGCGGCACACTTTGCC
AACTCGATGGCGGCCAAAGCGAAGGTTATTACATCAGCCCGACGATTATGAAAGGCCACAATAAGATGCGTATCTTCCAA
GAGGAGATCTTCGGCCCTGTGATTTCGGTCACCACCTTCAAAGATGAAGCCGAAGCCTTAGCGATCGCGAACGATACTGA
GTACGGCTTAGGCGCTGGTGTGTGGACGCGAGACATGAACACGGCTCAACGTATGGGACGCGGCATTCAAGCGGGCCGCG
TGTGGATTAACTGTTACCATGCCTATCCTGCCCATGCTGCTTTTGGTGGTTACAAAAAATCCGGTATTGGCCGCGAAACC
CATAAGATGATGCTCAACCATTATCAAAATACCAAGAATCTCTTGGTAAGTTACGATGTGAATCCACTGGGTTTCTTCTA
A

Protein sequence :
MIYAQPGTAGAIVNFKEKYANFIGGKWVAPVNGKYFDNRSPVNGQNFCQIPRSDAQDIELALDAAHAAKEAWGKTSVTER
SNLLLRIADRVEQNLEYLAVAETWENGKAVRETLNADLPLFVDHFRYFAGCIRAQEGSAADIDGNTVSYHFPEPLGVVGQ
IIPWNFPLLMAAWKIAPALAAGNCVVLKPAEQTPVSILVLLELIEDLLPAGILNVVNGFGAEAGQALATSKRIAKLAFTG
STEIGYHILKCAAESLIPSTVELGGKSPNVFFADVMDHEDEYLNKAVEGMLLAFFNQGEVCTCPSRVLVQESIFDRFIEK
VLARAQTIKQGDPLDTDTQVGAQASKEQFDKILSYLAIGKAEGAEVLLGGTLCQLDGGQSEGYYISPTIMKGHNKMRIFQ
EEIFGPVISVTTFKDEAEALAIANDTEYGLGAGVWTRDMNTAQRMGRGIQAGRVWINCYHAYPAHAAFGGYKKSGIGRET
HKMMLNHYQNTKNLLVSYDVNPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-164 71
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-173 70
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-173 70
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-173 70
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-172 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_0248 YP_001364482.1 aldehyde dehydrogenase VFG0082 Protein 2e-164 71