Gene Information

Name : Shew185_2342 (Shew185_2342)
Accession : YP_001366543.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Unknown
Product : DNA-directed DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0389
EC number : 2.7.7.7
Position : 2796808 - 2798082 bp
Length : 1275 bp
Strand : +
Note : PFAM: UMUC domain protein DNA-repair protein; KEGG: sbl:Sbal_2353 DNA-directed DNA polymerase

DNA sequence :
ATGACGCCCTCACTATTCGCACTCGTCGATTGCAATAATTTTTATGCATCCTGTGAGCGGATGTTTAGGCCAGATTTAGC
TGGCAGGCCGATTGTAGTGTTATCCAACAACGATGGCTGCGTCGTCGCCCGCTCGGCAGAGGCAAAACAACTTGGCATCA
AAATGGCGGTGCCTGTGTATCAAATCGCAAACCAACTCCGCCAGCATCACATCGCGGTATTCTCCTCCAACTATGCACTC
TATGCCGACATATCAAATAGAGTCATGACCACCTTAGAGCAAATGGTACCGAAAGTAGAAGTGTATAGTATTGATGAAGC
GTTTTTAGATCTTTCTCGTCTCGATAAATGCATTGATATTCGTCAGCTTGCACTTGATATTTATCAACGAATACCACAGT
GGATTGGGATCAGTATTTGCGTCGGCATTGGACCGACAAAAACTCTCGCTAAACTGGCAAACCATGCCGCGAAACGTTAT
CCCGCGACGCGGGGAGTGGTTGACTTGCGCGACCGTGAACGCCAACGACGGCTGATGGCGCTTATCCCTGTCGACGAAGT
CTGGGGAATAGGCCGTAGGCTTACAAAACGCTTGAACATCATGGGCATAAATACCGCGTTGCAATTGGCGGATGCGCATC
CAAAGCTTATCCGCGACACCTTTTCTGTCACCGTTGAGCGCACGGTACGCGAACTTAACGGCATTGCCTGTGATGACATA
CAAGAGGTCGCCGCCACTAAGCAACAAATTATCAGCTCCCGATCCTTTGGCAGCCGTATTGATAATTTAGAAGCGATGCA
ACAGGCAATCAATGAATACACTTTTAGGGCCTGTGAAAAACTGCGCTCCGAGCGCCAGTACGCTAAAGCAATGTCGGTAT
TTGTCCGTACTAGCCCTTTTAGCGATGCAACTCCCCAGTACAGCAAATCGCTGTCGGGCAGTTTAGTTCGCCCCAGCAAT
GATACGCGTGATTTTGTCACCCTTGGCCAAAGCCTACTGCAACGCATTTGGCGTGAAGGTCATGCCTATGCAAAGGCCGG
TGTCATGTTAGGGGATTTTTTTGGTGCAGGCGTGTTTCAGCTCGGATTATTCGATGACGTCACGCCTAGACCTAAAAGCA
AGGAGTTAATGCAATTACTCGATAAAGTTAACCACAGCGGTCATGGAAAAATTTGGTTTGCAGGACAAGGTATTGACCCC
ACTTGGGGAATGAAGCGTGAGCAGCTTTCCCCTCGTTACACCACCCAATGGGCACAATTACCCATAGTGAAATAA

Protein sequence :
MTPSLFALVDCNNFYASCERMFRPDLAGRPIVVLSNNDGCVVARSAEAKQLGIKMAVPVYQIANQLRQHHIAVFSSNYAL
YADISNRVMTTLEQMVPKVEVYSIDEAFLDLSRLDKCIDIRQLALDIYQRIPQWIGISICVGIGPTKTLAKLANHAAKRY
PATRGVVDLRDRERQRRLMALIPVDEVWGIGRRLTKRLNIMGINTALQLADAHPKLIRDTFSVTVERTVRELNGIACDDI
QEVAATKQQIISSRSFGSRIDNLEAMQQAINEYTFRACEKLRSERQYAKAMSVFVRTSPFSDATPQYSKSLSGSLVRPSN
DTRDFVTLGQSLLQRIWREGHAYAKAGVMLGDFFGAGVFQLGLFDDVTPRPKSKELMQLLDKVNHSGHGKIWFAGQGIDP
TWGMKREQLSPRYTTQWAQLPIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
samB NP_458681.1 UV protection protein Not tested SPI-7 Protein 2e-112 55
umuC NP_807889.1 DNA polymerase V subunit UmuC Not tested SPI-7 Protein 2e-112 55
rulB CAI36137.1 nucleotidyltransferase/DNA polymerase Not tested PPHGI-1 Protein 7e-80 46
unnamed ABR13403.1 DNA-directed DNA polymerase Not tested PAGI-5 Protein 1e-63 42