Gene Information

Name : Shew185_1920 (Shew185_1920)
Accession : YP_001366126.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Resistance
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2287388 - 2288047 bp
Length : 660 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sbl:Sbal_1894 two component transcriptional regulator, winged helix family

DNA sequence :
ATGCGTATTATGTTGGTTGAAGACAATGAGTTATTAGCCCAAGGGATTTGCTTAAGTTTGGCAAAGCTGGGCATGCAGGT
TGATCACCTTAATAGTTATCAGCAAGCATTACAGGGTGTTAAAAATGAAAGCTTCAGTGCCATAGTGCTCGATCTGGGTT
TACCGGACGGTAACGGTAAAGATTTACTCAAGGCGTGGCGTCAGCAGGGGGTGTCAATTCCTACAATAGTCCTGACCGCC
AATACGGATTTTGACACTAAGCTCGAGTGCTTAGACATGGGCGCCGATGATTATCTCGGTAAACCCTTCGATGTGCGAGA
GCTCGCCGCTCGCATTCGCGCCATTGTCAGACGCCAGTACGGACTCGATCACAACAGTTTGATTATTGGTGCTTTGTGTA
TTGATTTAAATACCCGCGAAGTGACCTTTCGCGATCAAAATGTGCTGCTTTCGCGGCGTGAATTCCAATTATTGCTTGAA
CTCGCACAATCAGCAGGGCGCGTATTGACGCGCAGCCAACTGGAACAGTTAACCTATGGCTGGGATGAAGTCGGCAGCAA
CTCGATTGAAGTACACATTCATCATTTGCGTAAAAAGCTCGCCAATGAGCTGATTAAAACCGTGCGTGGAATTGGCTATA
CCTTGATTGAAATAAACTAA

Protein sequence :
MRIMLVEDNELLAQGICLSLAKLGMQVDHLNSYQQALQGVKNESFSAIVLDLGLPDGNGKDLLKAWRQQGVSIPTIVLTA
NTDFDTKLECLDMGADDYLGKPFDVRELAARIRAIVRRQYGLDHNSLIIGALCIDLNTREVTFRDQNVLLSRREFQLLLE
LAQSAGRVLTRSQLEQLTYGWDEVGSNSIEVHIHHLRKKLANELIKTVRGIGYTLIEIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-37 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_1920 YP_001366126.1 two component transcriptional regulator BAC0487 Protein 4e-33 42