Gene Information

Name : Shew185_0152 (Shew185_0152)
Accession : YP_001364386.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 182950 - 183384 bp
Length : 435 bp
Strand : +
Note : TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: sbl:Sbal_4203 general secretion pathway protein G

DNA sequence : 
ATGCAAATGAACAAGAAACATCAAGGTTTTACCTTACTCGAAGTGATGGTGGTTATCGTTATTTTAGGGATTTTAGCCTC
TATGGTGGTGCCTAACTTAATGGGTAACAAAGATAAAGCTGACCAACAAAAAGCAGTATCTGACATAGTCGCACTCGAAA
ATGCCTTAGACATGTATAAGTTAGACAACGGCGTCTATCCAACGACCGAGCAAGGCTTAGAAGCCTTAGTGCAAAAACCA
ACGATTTCACCTGAGCCACGTAATTACCGTGAAGATGGTTATGTCAAACGTCTGCCAGAAGATCCATGGCGCAATAAGTA
CTTGCTGCTCAGCCCTGGCGAAAACGGCAAGCTAGATATATTCACTGCAGGCCCAGATGGTCAACCAGGTACCGAAGATG
ACATCGGTAACTGGAATTTACAGAATTTCCAATAA

Protein sequence : 
MQMNKKHQGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYKLDNGVYPTTEQGLEALVQKP
TISPEPRNYREDGYVKRLPEDPWRNKYLLLSPGENGKLDIFTAGPDGQPGTEDDIGNWNLQNFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 5e-45 70
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-45 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_0152 YP_001364386.1 general secretion pathway protein G VFG2050 Protein 2e-45 70
Shew185_0152 YP_001364386.1 general secretion pathway protein G VFG1871 Protein 4e-34 56
Shew185_0152 YP_001364386.1 general secretion pathway protein G VFG0180 Protein 4e-33 54