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Name : Shew185_0149 (Shew185_0149) Accession : YP_001364383.1 Strain : Shewanella baltica OS185 Genome accession: NC_009665 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 177987 - 180101 bp Length : 2115 bp Strand : + Note : TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: son:SO0166 general secretion pathway protein D DNA sequence : ATGAATAACAAAAGGATTCGACGCAAGCTGATTGCAGGGATTGTTGCGGGTGCAGCCATGTTCTCCTCCCAATTCGCTTG GTCTGAACAGTATGCGGCCAACTTTAAGGGCACGGATATTCAAGAGTTTATCAACATAGTTGGTAAAAACTTGAACAAGA CCATCATAGTCGACCCGACGATCCGCGGTAAAATCAACGTTCGCAGTTATGATCTGCTGAACGATGAACAGTATTACCAG TTTTTCCTCAACGTCTTACAAGTCTACGGTTATGCCATCGTCGAGATGGAAAATAACGTCATCAAAGTCATCAAAGACAA AGACGCCAAAACTGCAGCAATCCGAGTGGCTAATGATGCCGAACCTGGGATAGGCGATGAGATGGTCACGCGTATCGTGG CGCTGTATAACACTGAGGCCAAGCAATTAGCTCCGCTGTTACGCCAATTAAATGATAACGCGGGTGGCGGTAACGTAGTG AACTACGATCCCTCTAACGTCTTGATGTTGTCTGGTCGTGCTGCTGTGGTGAACAAGTTAGTGGAAATTGTCCGCCGCGT AGATAAACAGGGCGACACCTCAGTACAAGTGGTGCCGTTAGAGTTCGCTTCCGCCGGTGAAATGGTACGAATTATCGATA CCCTTTATCGCGCCACGGCTAACCAATCTCAAATGCCTGGTCAAGCGCCGAAAGTGGTTGCCGACGAACGTATCAACGCT GTGGTTGTTAGCGGCGACGAAAAGAGTCGCCAACGTGTGGTCGAACTTATTCATCGTCTCGATGCCGAGCAAGCCAGCAC GGGCAACACTAAGGTGCGTTACTTACGTTATGCCAAGGCCGAAGATTTAGTTGAAGTGCTGACAGGGTTTGCCCAAAAAT TAGAGGGTGATAAAGACCCAAGCGCTCAGGCTGCTGGTGGTAAACGCCGTAATGAAATCAATATCATGGCGCATACTGAA ACCAATGCCTTAGTGATCAGTGCTGAACCCGATCAAATGCGCACCATTGAGAGCGTGATTAATCAGCTCGACATCCGCCG TGCTCAGGTACTCGTAGAGGCCATTATTGTCGAAGTTGCCGAAGGCGACAGTGTCGGCTTTGGGGTGCAATGGGCGGCGA AAGCGGGTGGTGGCACTCAGTTTAATAACTTAGGCCCAACCATTGGTGAGATTGGCGCTGGTGTATGGCAGGCGCAAGAT AAAGAAGGCACATTCATCACTAACCCGAGTACTGGTCAGGTGATAGGTCAAAACCCGAGTACTAAGGGCGATGTTACCTT ACTTGCCCAAGCTTTAGGTAAAGTGAACGGTATGGCATGGGGTGTGGCCATGGGTGACTTTGGTGCGCTGATCCAAGCCG TATCCAGTGACACTAACTCAAACGTACTGGCGACACCTTCTATTACTACCTTGGATAACCAAGAAGCATCTTTCATCGTC GGTGATGAAGTGCCTATTCTGACGGGCTCTACCGCCAGCTCTAACAATAGCAACCCATTCCAAACCGTTGAACGTAAAGA GGTTGGGGTTAAGTTGAAAGTGGTGCCGCAGATCAACGAAGGCAATGCGGTTAAGCTGACGATTGAGCAGGAAGTATCAG GAGTTAACGGTAATACAGGTGTGGATATTTCCTTTGCGACACGCCGTTTAACCACTACCGTTATGGCTGATTCAGGGCAA ATTGTGGTTCTGGGGGGCTTGATCAACGAAGAAGTGCAAGAAAGTGTGCAAAAAGTGCCTTTCTTGGGTGACATTCCTAT TTTGGGACATTTATTCAAATCTTCTTCGAGCAAAAAGACCAAGAAAAACCTGATGATCTTCATCAAACCAACCATTATCC GTGATGGCATCACAATGGAAGGGATTGCTGGGCGTAAATATAACTATTTCAGAGCATTACAACTTGAGCAGCAAGAGCGT GGCGTTAACTTAATGCCAAATACAAAAGTGCCTGTGTTGGAAGAATGGAATCAATCAGAGTATTTGCCGCCAGAAGTTAA CGCGATTTTAGAGCGTTACAAAGAAGGCAAAGGTTTAGATGCCCAGATGCGCCAAACGGATCCGACTTTAAAGTCACTGG AAGAAAACAAGAATAAAGATAAAACCAATGAGTGA Protein sequence : MNNKRIRRKLIAGIVAGAAMFSSQFAWSEQYAANFKGTDIQEFINIVGKNLNKTIIVDPTIRGKINVRSYDLLNDEQYYQ FFLNVLQVYGYAIVEMENNVIKVIKDKDAKTAAIRVANDAEPGIGDEMVTRIVALYNTEAKQLAPLLRQLNDNAGGGNVV NYDPSNVLMLSGRAAVVNKLVEIVRRVDKQGDTSVQVVPLEFASAGEMVRIIDTLYRATANQSQMPGQAPKVVADERINA VVVSGDEKSRQRVVELIHRLDAEQASTGNTKVRYLRYAKAEDLVEVLTGFAQKLEGDKDPSAQAAGGKRRNEINIMAHTE TNALVISAEPDQMRTIESVINQLDIRRAQVLVEAIIVEVAEGDSVGFGVQWAAKAGGGTQFNNLGPTIGEIGAGVWQAQD KEGTFITNPSTGQVIGQNPSTKGDVTLLAQALGKVNGMAWGVAMGDFGALIQAVSSDTNSNVLATPSITTLDNQEASFIV GDEVPILTGSTASSNNSNPFQTVERKEVGVKLKVVPQINEGNAVKLTIEQEVSGVNGNTGVDISFATRRLTTTVMADSGQ IVVLGGLINEEVQESVQKVPFLGDIPILGHLFKSSSSKKTKKNLMIFIKPTIIRDGITMEGIAGRKYNYFRALQLEQQER GVNLMPNTKVPVLEEWNQSEYLPPEVNAILERYKEGKGLDAQMRQTDPTLKSLEENKNKDKTNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-146 | 52 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 6e-154 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shew185_0149 | YP_001364383.1 | general secretion pathway protein D | VFG2047 | Protein | 7e-145 | 52 |
