Gene Information

Name : rdgC (Shew185_1362)
Accession : YP_001365575.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 1638891 - 1639805 bp
Length : 915 bp
Strand : -
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGTGGTTTAAAAATCTTACTCTTTATCGTTTCAATAAACCTTTTGCCGTCGAAACCGAAGCGCTAGAAACTGCGTTGGC
CGATTTCACTTTCTCTCCGTGCTCAAGCCAAGATGTCAGTAAATTTGGTTTCTCTAATGCTTTAGGCAAGAAAGGCTGCT
CCTTGGTACACAGTGCCGACAATCGCCATCTGATCTGTGTGACTAAAGAAGAGAAAATTCTCCCAGGTCAAGTCATCAAA
GAAGCCTTAGAAGAAAAAGTCGCCCTCATTGAAGATGAAGAAAATCGTAAGATGGCGAAAAAAGAAAAAGATGCGCTAAA
AGATGAAATCATTACTAGCCTACTGCCACGCGCTTTTTCACGCCGCAGCCAAACCCATGCCTTGATTTTACCAGAGCTGG
AAATGATCCTTGTCGACAGTTCAAGTGCCACTAAAGCCGAAGAGCTGTTAGCTTTATTACGTAAAGCGCTCGGTAGTTTG
CCAGTGATCCCATTGAGCTTTAAAGCGCCAGTCGAATCCAATTTAACCGAATGGTTAAAACTTGGCAGTGCGCCATTACC
TTTTGAAATGCAAGATGAAGCAGAGCTTAAATCCGAAGCGGATGAAGGCGGCATTGTACGTTTCAAGCAACAGGATTTAA
AAGAAGATGAAGTCTTAGCTCACCTCGCAACAGGCAAGCAAGTCCACAAGTTAGCACTGCATTTCGGCCAATCGATTGCA
CTATTATTGCAATCGGATGCCAGCGTAAAACGTCTTAAATTCTCTGAAGAATTTAGAGCGGGTAACGATGAAGTCGGCAC
TGATGACCCTATGGCACGTTTAGATGCAGACTTCGCCTTAATGGGCAGCGAGTTAGTCGCCTTGATGCATGCACTCGTGG
CAGCACTAGGTGGACTCGAAGACGCGCAAGTTTAA

Protein sequence :
MWFKNLTLYRFNKPFAVETEALETALADFTFSPCSSQDVSKFGFSNALGKKGCSLVHSADNRHLICVTKEEKILPGQVIK
EALEEKVALIEDEENRKMAKKEKDALKDEIITSLLPRAFSRRSQTHALILPELEMILVDSSSATKAEELLALLRKALGSL
PVIPLSFKAPVESNLTEWLKLGSAPLPFEMQDEAELKSEADEGGIVRFKQQDLKEDEVLAHLATGKQVHKLALHFGQSIA
LLLQSDASVKRLKFSEEFRAGNDEVGTDDPMARLDADFALMGSELVALMHALVAALGGLEDAQV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 6e-48 44