Gene Information

Name : Shew185_1171 (Shew185_1171)
Accession : YP_001365386.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1397183 - 1398631 bp
Length : 1449 bp
Strand : +
Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: sbl:Sbal_1113 succinic semialdehyde dehydrogenase

DNA sequence :
GTGCAATTAAATGATCCGAGTTTGCTACATCAACAGTCTTTTATTAATGGTCAATGGTGTGATGCCGTTTCTGGTGACAC
GTTAAAGGTGGTTAATCCCGCAACCAATGCCCTGATTGGTCATGTTCCTAATATGGGACAAGTTGAAACTGAGATGGCGA
TTAAGGCGGCAGAAGCGGCTTTACCTGCATGGCGAGCGCTCACAGCCAAAGAGCGCGGCGCTAAGTTAAGGCTTTGGTTT
GAATTACTCAATGAAAACAGTGATGACTTAGCATTGCTCATGACGACTGAGCAGGGTAAACCGCTGGCAGAAGCGAAAGG
TGAAGTAACCTACGCGGCTTCGTTTATTGAGTGGTTTGCCGAAGAAGCGAAACGTATTTATGGCGATACTATTCCTGGGC
ATCAAGGGGATAAGCGCTTGATGGTGATCAAGCAGCCTGTCGGTGTAACCGCCGCGATAACGCCGTGGAACTTTCCTGCG
GCGATGATCACCCGCAAAGCCGCTCCAGCGTTAGCTGCGGGTTGCACTATGGTGGTAAAACCGGCGCACCAAACACCATT
TACCGCTTTAGCGATGGCTGAACTCGCTAAGCGTGCCGGTATTCCTGCGGGCGTATTTAGTGTGTTAACGGGTGATGCGG
TGCAGATTGGTAATGAAATGTGCAGCAACCCGATAGTGCGTAAGCTGTCTTTCACTGGCTCAACCAATATCGGTATTAAA
TTAATGGCGCAATGTGCGCCTACCTTAAAAAAACTGTCGCTAGAGCTTGGCGGCAATGCGCCATTTATCGTGTTTAATGA
TGCCAATATCGATGCCGCTGTCGAAGGCGCTATGATTGCTAAATATCGTAATGCTGGCCAAACCTGCGTCTGCGCTAACC
GCATTTATGTGCAAGATGGTGTATACGACGAGTTCGCCTTAAAACTCAGCACTGCAGTGGGCAAGCTTAAGGTTGGAGAG
GGCATCAAGGAGGGCATCACTACGGGTCCGTTGATCAATGCTGCTGCGGTCGAAAAAGTGCAAAGTCACCTTATCGATGC
TATTGCCAAAGGCGCATCTGTGCTCGCTGGCGGCAAAGTCCACGACCTTGGCGGTAATTTCTTTGAACCAACCGTGCTCA
CTAACGTTGATAAAAGCATGCTCGTTGCCCGCGAAGAAACCTTTGGTCCACTCGCGCCGCTGTTTAAATTCAGCGATGTT
GATGATGTGATTAAACAAGCTAACGATACTGAATTTGGCCTTGCCGCTTATTTCTATGGCCGCGATATTTCACTGGTGTG
GAAAGTCGCCGAAGCCTTGGAATACGGCATGGTTGGGGTCAACACTGGCTTGATTTCGACGGAAGTCGCGCCCTTTGGTG
GGATGAAATCCTCTGGGCTGGGCCGTGAAGGTTCTAAGTACGGCATCGAAGAATATTTAGAAATGAAGTACATCTGCATG
TCCGTTTAA

Protein sequence :
MQLNDPSLLHQQSFINGQWCDAVSGDTLKVVNPATNALIGHVPNMGQVETEMAIKAAEAALPAWRALTAKERGAKLRLWF
ELLNENSDDLALLMTTEQGKPLAEAKGEVTYAASFIEWFAEEAKRIYGDTIPGHQGDKRLMVIKQPVGVTAAITPWNFPA
AMITRKAAPALAAGCTMVVKPAHQTPFTALAMAELAKRAGIPAGVFSVLTGDAVQIGNEMCSNPIVRKLSFTGSTNIGIK
LMAQCAPTLKKLSLELGGNAPFIVFNDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQDGVYDEFALKLSTAVGKLKVGE
GIKEGITTGPLINAAAVEKVQSHLIDAIAKGASVLAGGKVHDLGGNFFEPTVLTNVDKSMLVAREETFGPLAPLFKFSDV
DDVIKQANDTEFGLAAYFYGRDISLVWKVAEALEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIEEYLEMKYICM
SV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 9e-147 66
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 3e-82 42