Gene Information

Name : Shew185_1153 (Shew185_1153)
Accession : YP_001365368.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1374155 - 1375651 bp
Length : 1497 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: shw:Sputw3181_3079 aldehyde dehydrogenase (NAD(+))

DNA sequence :
ATGAGCACACCGAAGAAACGCAGCGAATGGGAAAGTCTTGCTGCCAGCCTGTCTATTAATGGGAAGGCGTTTATCAATGG
CGAATACCAAGATGCCGTTTCGGGTAACACCTTTGATTGTATTAGCCCTATCGATGGCCGCTTGCTGGTAAAAGTGGCGA
GTTGCGATCTTGCGGATGCCAATCTTGCGGTTGCCAATGGCCGCAGCGTATTTGAGTCCGGTGTTTGGTCGCAGCAGTCT
CCAGTAAAGCGCAAACAAGTGATGATACGTTTCGCCGAATTACTCGAAGAAAATGCCAATGAACTCGCATTGTTAGAAAC
CCTCGACATGGGTAAACCTATTCGTTTCTCTAAAGCGGTGGATGTGGTGGGTGCCGCCCGTGCGATTCGCTGGTCTGGCG
AAGCGATTGATAAAATTTACGATGAACTCGCACCAACCGCTCACAATGAAATAGGCATGATCACCCGTGAACCTGTTGGT
GTTGTCGCTGCGATTGTGCCGTGGAACTTCCCTATGCTGATGGCGTGTTGGAAGCTCGGGCCTGCACTTGCTACAGGTAA
CAGTGTGGTATTAAAACCCTCTGAAAAATCTCCCTTAACGGCAATCCGCATGGCACAACTCGCCATTGAAGCCGGGATCC
CACAAGGCGTATTAAACGTGTTGCCAGGATTTGGCCATACCGTAGGTAAAGCCTTAGCCCTGCATATGGATGTGGATACG
TTGGTGTTTACAGGTTCCACCAAAATCGCAAAACAATTAATGATTTACGCTGGCGAGTCGAACATGAAACGCGTGTGGTT
AGAGGCCGGAGGTAAGAGCCCCAATATCGTCTTTAATGACGCGCCAGATCTGAAAGCCGCTGCCGTTGCTGCGGCCGAAG
CCATTGCCTTTAACCAAGGTGAAGTTTGCACCGCAGGTTCGCGTTTGCTGGTGGAATCTGGGGTGAAAGATGAGCTTATC
GCGCTTATCGCAGAGGAGCTAGCCTCATGGCATCCGGGTCATCCACTCGATCCTGCGACTGTGAGCGGCGCCGTAGTCGA
TAAACAACAGTTAGACACAGTACTCAGTTACATTAAAGCAGGTAAAGATGAAGGTGCGACCTTAGTCCACGGTGGCAGCC
AAGTCATGGCCGATACGGGCGGTGTATATGTGCAGCCAACGGTATTTTCTAACGTAAACAATCAGATGAAGATTGCCAGC
GAAGAGATCTTCGGCCCTGTGCTCTCTGTCATTGAATTTAATGGCATGGAAGAAGCGATATCAATCGCCAACGATACCAT
CTACGGTTTAGCCGCTGGCGTGTGGACATCGAATATAAGCAAGGCCCATAAAACCGCCAAAGCCCTGCGCGCTGGCATGG
TATGGATCAACCATTACGATGGTGGCGATATGACAGCGCCATTCGGTGGCTATAAACAGTCAGGTAATGGCCGAGATAAA
TCTCTGCACTCCTTCGACAAATACACAGAACTGAAAGCGACTTGGATCGTGTTATAA

Protein sequence :
MSTPKKRSEWESLAASLSINGKAFINGEYQDAVSGNTFDCISPIDGRLLVKVASCDLADANLAVANGRSVFESGVWSQQS
PVKRKQVMIRFAELLEENANELALLETLDMGKPIRFSKAVDVVGAARAIRWSGEAIDKIYDELAPTAHNEIGMITREPVG
VVAAIVPWNFPMLMACWKLGPALATGNSVVLKPSEKSPLTAIRMAQLAIEAGIPQGVLNVLPGFGHTVGKALALHMDVDT
LVFTGSTKIAKQLMIYAGESNMKRVWLEAGGKSPNIVFNDAPDLKAAAVAAAEAIAFNQGEVCTAGSRLLVESGVKDELI
ALIAEELASWHPGHPLDPATVSGAVVDKQQLDTVLSYIKAGKDEGATLVHGGSQVMADTGGVYVQPTVFSNVNNQMKIAS
EEIFGPVLSVIEFNGMEEAISIANDTIYGLAAGVWTSNISKAHKTAKALRAGMVWINHYDGGDMTAPFGGYKQSGNGRDK
SLHSFDKYTELKATWIVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 9e-122 58
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-71 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-72 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-72 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-72 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_1153 YP_001365368.1 aldehyde dehydrogenase VFG0082 Protein 6e-72 42