Gene Information

Name : Shew185_0998 (Shew185_0998)
Accession : YP_001365213.1
Strain : Shewanella baltica OS185
Genome accession: NC_009665
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1191509 - 1192252 bp
Length : 744 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_3341 ABC transporter related

DNA sequence : 
ATGTTATCAATGAAGAGTGTGAGCAAGGTTTTTAAAACGGATTTAGTGGAAACCCACGCCCTGCGCGATTTTAACCTCGA
AGTGAATGAAGGCGAGTTTGTTGCGGTCACGGGTCCTTCTGGCTCAGGTAAAACGACTTTTTTAAATATCGCGGGTTTGC
TCGAAGGTTTTACCCACGGTGACTATTTTCTCGATGGCATTAACGTGTCTAACCTGAGCGATAACAAGAGCGCTGCTATC
CGTAACGAGAAAATCGGCTTTATCTTCCAAGGCTTTAACTTAATTCCTGACCTTAACTTGGCAGAAAATATCGAAGTGCC
GCTGCGCTACCGTGGTTTTAATGCCAAGGAACGCCAACGCCGCGTACAGCAAGCATTAGAACAAGTGGGTTTAGCTTCAC
GACTCAAGCATTTTCCCACTCAGCTTTCGGGCGGACAGCAACAAAGAGTGGCGATTGCCCGTGCTTTGGCGGGTGAACCC
CGCTTCCTGCTCGCCGATGAACCGACAGGTAACCTCGACAGCTTAATGGCGCGCCAAGTGATGGAATTACTTGAAAATAT
CAACCAAGCGGGCACCACCATCATCATGGTGACCCATGACCCCGAACTCGCTCGCCGCGCCCAGCGCAATATTCAAATTG
TCGACGGTCAAGTGTGTGATTTTACTATGTATCAGCCCCATGGCAGTGTGCAAACTGCGGCGACCCCGCACCCATTAGAC
AAACTTGTCGCCAACGCTGACTAA

Protein sequence : 
MLSMKSVSKVFKTDLVETHALRDFNLEVNEGEFVAVTGPSGSGKTTFLNIAGLLEGFTHGDYFLDGINVSNLSDNKSAAI
RNEKIGFIFQGFNLIPDLNLAENIEVPLRYRGFNAKERQRRVQQALEQVGLASRLKHFPTQLSGGQQQRVAIARALAGEP
RFLLADEPTGNLDSLMARQVMELLENINQAGTTIIMVTHDPELARRAQRNIQIVDGQVCDFTMYQPHGSVQTAATPHPLD
KLVANAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-35 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-35 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shew185_0998 YP_001365213.1 ABC transporter-like protein NC_008702.1.4606598. Protein 8e-46 52
Shew185_0998 YP_001365213.1 ABC transporter-like protein NC_012469.1.7686878. Protein 8e-51 48
Shew185_0998 YP_001365213.1 ABC transporter-like protein CP001581.1.gene798.p Protein 5e-37 45
Shew185_0998 YP_001365213.1 ABC transporter-like protein CP001581.1.gene598.p Protein 3e-30 42
Shew185_0998 YP_001365213.1 ABC transporter-like protein NC_012469.1.7685735. Protein 1e-35 41