Gene Information

Name : Krad_1240 (Krad_1240)
Accession : YP_001360992.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 1003618 - 1004688 bp
Length : 1071 bp
Strand : +
Note : PFAM: transport system permease protein; KEGG: sma:SAV6492 ferrichrome transport system permease protein

DNA sequence :
GTGGGCGTCCCCGCCCCCCGCGCGGCCGAGCGGGCCCGCGCCGGGCGCACCCTCCGCCTGGGGCGCGGGGTCTCGCTGCG
GGTCGAGGGCCGCGGCCTCGCCGTCTGCGCCGGCCTCCTCCTCGTCCTGGCCCTCGGGGTCGCGGTCAGCCTCAGCACCG
GCGACTACCCGGTCCCGGTGCCCGACGTGGTGCGCACCCTGCTGGGTCGCGGCGAGCGGGCCCAGGAGTTCATCGTCCTG
GGCCTGCGCCTGCCCCGCGTGGTGACGGGGCTGCTGGTGGGGCTGGCCCTGGGGGTGGCCGGGGCGGTGTTCCAGCTGGT
GACCCGCAACCCGCTGGGCTCCCCCGACGTCATCGGCTTCACCTCCGGCGCGGTGACCGGCGCGCTGGTCGTGCTGCTGG
TCCTGGGCGGCGGGGGGGAGCGGACGGCCGTCGGGGCGCTGGTCGGCGGCGGGGTGACGGCGCTGGTCGTCTACCTGCTC
GCCCACCGCGGCGGGGTCCAGGGCTACCGCCTGATCCTCGTCGGGATCGGCCTCACGGCCGTGCTGCAGGCCGTCAACAG
CTACCTGCTGACCCGCGCGCGCGTCGAGGAGGCCCAGCAGGCCCAGCTGTGGATCACCGGCTCGCTCAACGGCCGCGGCT
GGGAGCAGGCCGCGCCGCTGGGCCTCGGCCTGGCCGTGCTCCTCCCCCTCACCCTGCTGGCCGGGCGCTCCCTGGCGGTG
CTCGACCTCGGCGACGACGCCGCGCGCGCCCTGGGCGTGCACGTCGGCCGCACCCGGCTGGTCGTGCTCGTCACCGCCAC
CGCGATGACCGCGCTCGCCGCGATGGCCGCGGGCCCGGTCGCCTTCGTCGCCCTCGCCGCCCCGCAGGTCGCCCGGCGCC
TGACCGGGTCCGTGGGTCCCGGCCTGGTGGCCGCCGGCCTGACGGGGTCGCTGCTGGTGCTGGTCAGCGACTTCGCCGCG
CAGCGGCTGTTCGCCCCGACCCAGCTGCCGGTGGGGGTGCTGACCGGCGCCGTCGGCGGCGTCTACCTGGCCTGGCTGCT
GGTCACCCAGTGGCGCCGCGGCCGCGGCTGA

Protein sequence :
MGVPAPRAAERARAGRTLRLGRGVSLRVEGRGLAVCAGLLLVLALGVAVSLSTGDYPVPVPDVVRTLLGRGERAQEFIVL
GLRLPRVVTGLLVGLALGVAGAVFQLVTRNPLGSPDVIGFTSGAVTGALVVLLVLGGGGERTAVGALVGGGVTALVVYLL
AHRGGVQGYRLILVGIGLTAVLQAVNSYLLTRARVEEAQQAQLWITGSLNGRGWEQAAPLGLGLAVLLPLTLLAGRSLAV
LDLGDDAARALGVHVGRTRLVVLVTATAMTALAAMAAGPVAFVALAAPQVARRLTGSVGPGLVAAGLTGSLLVLVSDFAA
QRLFAPTQLPVGVLTGAVGGVYLAWLLVTQWRRGRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 5e-19 45
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-19 45
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 2e-19 45
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 2e-19 45
iusC YP_005143744.1 iron ABC transporter permease Virulence Not named Protein 3e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_1240 YP_001360992.1 transport system permease VFG0928 Protein 6e-19 47