Gene Information

Name : Krad_1241 (Krad_1241)
Accession : YP_001360993.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 1002533 - 1003594 bp
Length : 1062 bp
Strand : +
Note : PFAM: transport system permease protein; KEGG: sma:SAV6491 ferrichrome transport system permease protein

DNA sequence :
GTGTCCTCCTCCACGAGCGCGCCGCCGGCCGCGACGGCCCCCGCTGGGCGAGCCCCCGCGCGGCGGCGCCGGAGCCGGCC
CACGGCCCTGCTGCTGGCGTGCGCGCTGCTGGTGGTCGCGGTGCTGGCCAGCCTCGCCGTCGGGTCCCGGGAGGTCCCCC
TGGGCACCGTCCTCGACGCCCTGCGCGGGATCGGCGCCGACTCCCAGGACGCCCTCGTGGTGCGGGAGCTGCGGGTGCCC
CGCACCCTCGTCGGGATCGTCGTGGGCATCGCGCTGGGCCTCTCCGGCGCCCTCATGCAGGCGCTGACCCGCAACCCGCT
GGCCGACCCCGGGCTGCTGGGCGTCAACGCGGGCGCCGCGGCGGCCATGGTGACCGCGGTCGCGGTCCTCGGGCTCACCT
CGCGGCTGCAGCTGGTGTGGGCGTCGATGCTGGGCGCGGCCGTCGTGTCGGTGCTCGTCTACGTCCTCGGCGCCACCGGC
CGCGGCGGGGCGACCCCGGTGCGGCTCGCGCTGGCCGGGACCGCCGTCTCGGCCGCGCTCCACGCCTACACGACCGCCCA
GGTGCTGCTGGACACCACGACCTTCGACCGGTTCCGCTTCTGGCAGGTCGGGTCCCTGGCCGGGCAGGACGCGACGGTCC
TGCGCCAGCTGCTGCCGTTCTTCGCCGTCGGCACCGTCCTGGCCCTCAGCCAGGCCCGGGCCCTCAACGCCCTCGCCCTC
GGCGAGGACTCCGGCCGGGCCCTGGGGGCCAGCACCACCCGCACCCGGGTCATCGCGGCGCTGGCCGTCACGCTGCTGTG
CGGGGCCGCCACGGCCGCCGCCGGGCCCATCGCCTTCGTCGGCCTCGCCGTCCCCCACGTGGTGCGCGCCCTGACCGGAC
CGGACCAGCGCTGGGTCCTGCCCCTGTCCTGCCTCGTCGCCCCGGCCCTGCTGCTGCTCGGCGACGTCCTGGGCCGGGTC
GTCGTGCGGCCCGGCGAGCTGGAGGTCAGCATCGTCACCGCGCTGCTCGGGGCGCCCGTCCTCGTCGCCCTCGTCCGCCG
CCGCCGGCTGGCCCAGCTGTGA

Protein sequence :
MSSSTSAPPAATAPAGRAPARRRRSRPTALLLACALLVVAVLASLAVGSREVPLGTVLDALRGIGADSQDALVVRELRVP
RTLVGIVVGIALGLSGALMQALTRNPLADPGLLGVNAGAAAAMVTAVAVLGLTSRLQLVWASMLGAAVVSVLVYVLGATG
RGGATPVRLALAGTAVSAALHAYTTAQVLLDTTTFDRFRFWQVGSLAGQDATVLRQLLPFFAVGTVLALSQARALNALAL
GEDSGRALGASTTRTRVIAALAVTLLCGAATAAAGPIAFVGLAVPHVVRALTGPDQRWVLPLSCLVAPALLLLGDVLGRV
VVRPGELEVSIVTALLGAPVLVALVRRRRLAQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 4e-22 45
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 4e-22 45
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 4e-22 45
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 4e-22 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_1241 YP_001360993.1 transport system permease VFG0926 Protein 2e-24 47