Gene Information

Name : Krad_1349 (Krad_1349)
Accession : YP_001361101.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 877663 - 878439 bp
Length : 777 bp
Strand : +
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: aau:AAur_2501 ABC transporter, ATP-binding protein

DNA sequence :
GTGCCAGAACCCAGCCACCGCGCCACCGTGGCGCAGACCGTCCGAGACGCCGCGCACCCCGCGGTGCGCGCGGTCGGGCT
GCGCAAGACCTACGGCCGCGGCGACGCCGTCGTGCACGCCCTCGCCGGGGTGGACGTGGAGTTCACCCGTGGGGAGTTCA
CCGCCATCATGGGTCCCTCCGGGTCCGGCAAGTCCACGCTCATGCACTGCCTCGCCGGGCTGGACACCGCCTCCGCGGGC
CGGGTGTTCCTGGGCGAGACCGAGCTGACCGCCCTCAAGGACGCCGAGCTCACGCGGCTGCGCCGCGAGCGCATCGGCTT
CGTCTTCCAGAGCTTCAACCTCCTGCCCGTCCTCGACGCCGCGGAGAACATGCTGCTGCCGCTGCGGCTGGCCGGGCGCG
AACCGGACCCCGCCTGGCGCGAGGACGTGGTGCGCCGGCTGGGGCTGAGCGACCGCCTCACCCACAAGCCCCACGAGCTC
TCCGGGGGCCAGCAGCAGCGCGTCGCGGTGGCGCGGGCCCTGCTCCCGCGACCGGACGTGGTGTTCGCCGACGAACCCAC
CGGGAACCTCGACTCCCGCGCCGGCGCGGAGGTCCTCAGCCTGCTGCGCGGCAGCGTGCGCGAGTTCGGCCAGACCGTCG
TCATGGTCACCCACGACCCGGTGGCCGCCAGCTACGCCGACCGCGTCGTCCTCATCGCCGACGGCGGTCTGGCGGGTGGG
CTGACCAGCCCCACGCCCGACGACGTCATCGACGCCCTGCGCACCCTGGGGGCCTGA

Protein sequence :
MPEPSHRATVAQTVRDAAHPAVRAVGLRKTYGRGDAVVHALAGVDVEFTRGEFTAIMGPSGSGKSTLMHCLAGLDTASAG
RVFLGETELTALKDAELTRLRRERIGFVFQSFNLLPVLDAAENMLLPLRLAGREPDPAWREDVVRRLGLSDRLTHKPHEL
SGGQQQRVAVARALLPRPDVVFADEPTGNLDSRAGAEVLSLLRGSVREFGQTVVMVTHDPVAASYADRVVLIADGGLAGG
LTSPTPDDVIDALRTLGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-40 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-43 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-43 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-43 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-26 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_1349 YP_001361101.1 ABC transporter NC_008702.1.4606598. Protein 2e-37 48
Krad_1349 YP_001361101.1 ABC transporter CP001581.1.gene598.p Protein 3e-53 47
Krad_1349 YP_001361101.1 ABC transporter CP001581.1.gene798.p Protein 4e-49 47
Krad_1349 YP_001361101.1 ABC transporter NC_012469.1.7686878. Protein 3e-44 44