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Name : fliP (Krad_1666) Accession : YP_001361416.1 Strain : Kineococcus radiotolerans SRS30216 Genome accession: NC_009664 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : 3.1.1.3 Position : 537734 - 538597 bp Length : 864 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : GTGAAGAACTCCCGTGCTCGCACCCTGGTCGCGGCGCTGGTGCTGTCCGGCGGACTGATCGCCGGAGGTGCCGCGACCGC GCAGGCCGCCGCCCCGGCCACCGTCTCCGCCGCCGCCCCCGTCGCGTACACGACGGGCGTGAGCGCGGGCGCCGTCGCCC CCGCCGACCCGGTCGCCCCGCAGGCCCCGGCCGCCCCCGGCTCGGTGTCGCTGGACATCAACGGCGTCGACGGCAAGCCC AGCCAGTCCATCACCGTCATCATCGCCCTGACGATCCTGTCGGTGGCCCCCGCGCTGCTGCTGCTGACGACCTGCTTCAC CAAGATCCTCATCGTCCTGGGCCTGACGCGCAACGCGCTCGGCCTGCAGGGCACCCCGCCCAACCAGGTCCTCGCCGGCC TGGCGCTGTTCCTCACGATGTTCGTGATGGCCCCCACCTTCGGCGCGATCAACGACACCGCGGTCCAGCCCTACCTCAAG GGCGAGAAGACCGCCACGGTCGCCTTCACCGACGGCAGCCAGCCGTTGAAGGAGTTCATGCTGAAGCAGACCCGGCCCGA GGAACTGGCCCTGATGACGAAGGCCGCCAAGCGCGACCTCCCCGCCACCCGCGAGGAGACCCCGCTGACGACCCTGGTGC CCGCCTTCGCCCTCTCCGAGCTGCGCAGCGCCTTCATCATCGGCTTCGTGATCTTCATCCCGTTCCTGGTGATCGACATC GTCGTCTCAGGGGCCCTGATGAGCCTGGGCATGATGATGCTGCCCCCGGTCACGGTGTCCCTGCCCTTCAAGCTGCTGCT GTTCGTCATGATCGACGGCTGGGGACTGATCATCAAGGCCCTGGTGAGCTCCTACACGGGCTGA Protein sequence : MKNSRARTLVAALVLSGGLIAGGAATAQAAAPATVSAAAPVAYTTGVSAGAVAPADPVAPQAPAAPGSVSLDINGVDGKP SQSITVIIALTILSVAPALLLLTTCFTKILIVLGLTRNALGLQGTPPNQVLAGLALFLTMFVMAPTFGAINDTAVQPYLK GEKTATVAFTDGSQPLKEFMLKQTRPEELALMTKAAKRDLPATREETPLTTLVPAFALSELRSAFIIGFVIFIPFLVIDI VVSGALMSLGMMMLPPVTVSLPFKLLLFVMIDGWGLIIKALVSSYTG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-31 | 44 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-30 | 44 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 7e-31 | 44 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-30 | 44 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-30 | 44 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-29 | 44 |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 6e-19 | 42 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 6e-19 | 42 |
| hrcR | AAG33884.1 | HrcR | Virulence | Hrp PAI | Protein | 7e-21 | 42 |
| hrcR | AAB06005.2 | HrcR | Virulence | Hrp PAI | Protein | 2e-30 | 41 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 3e-19 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 3e-19 | 41 |
| spaP | NP_311752.1 | surface presentation of antigens protein SpaP | Not tested | LIM | Protein | 2e-28 | 41 |
| epaP | AAZ31293.1 | EpaP | Virulence | ETT2 | Protein | 3e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001361416.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 2e-49 | 57 |
| fliP | YP_001361416.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 8e-44 | 53 |
| fliP | YP_001361416.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 4e-43 | 52 |
| fliP | YP_001361416.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 2e-47 | 50 |
| fliP | YP_001361416.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 4e-28 | 43 |
