Gene Information

Name : Krad_2319 (Krad_2319)
Accession : YP_001362064.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4664870 - 4665607 bp
Length : 738 bp
Strand : -
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: sco:SCO4666 ABC-transporter ATP-binding protein

DNA sequence :
ATGACGGCACTGCCCCTGATCGCTCACGATGTCACCAAGTCCTTCCCCGACCGTGACGGTACCGGCGTCACTCCCGTGTT
GCGGGGGGTGAGCTTGTCGGTGCAGCCCGGTGAGCTGGTCTCGGTCGTGGGCCCCAGCGGCTCGGGGAAGTCCACGCTGC
TTCACTGTCTCTCCGGCTTGGAGTCGCCGACCTCCGGTTCGGTGCAGATCGCCGGCACCGCCTTGGCCGGCTTGAGCGGC
AGGTCGCTGGCCCGGCTGCGGCGTGAGCACGTCGGGTTCGTCTTCCAGTCCTACAACCTCATCTCCTCCCTGACCGCCTG
GGACAACGTGGCGTTGCCGGCGCGGTTGGCGCGCCGGCGCGTGCGTGAGGACGAGGTCGACCGGGCCCTGGCCCACGTCG
GTCTGACCGAACGTGCGCGCTTCAAGCCGGCCGCCCTCTCCGGTGGGCAGCAGCAGCGCGTTGCCATCGCTCGGGCCCTG
GCGGTGGAACGCGACATCGTCTTCGCCGACGAGCCCACCGGCGCCCTGGACACCACCGCCGGGGCGCAGGTGCTGGCCCT
GCTTCGCCGGGCCGCCTCCGGGCAGCGGTCGGTGGTCATGGTGACCCACGACCTGGAGGCGGCGGCCCTGGCTGACCGGG
TGCTGGTGCTGCGGGACGGCTCGGTGCACAGCGAACTGCGCGATGCCAGCGCAGCGCAGGTCCTCGACGCCGTCACTCGC
GCCGGCGTGAACGCGTGA

Protein sequence :
MTALPLIAHDVTKSFPDRDGTGVTPVLRGVSLSVQPGELVSVVGPSGSGKSTLLHCLSGLESPTSGSVQIAGTALAGLSG
RSLARLRREHVGFVFQSYNLISSLTAWDNVALPARLARRRVREDEVDRALAHVGLTERARFKPAALSGGQQQRVAIARAL
AVERDIVFADEPTGALDTTAGAQVLALLRRAASGQRSVVMVTHDLEAAALADRVLVLRDGSVHSELRDASAAQVLDAVTR
AGVNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 50
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 50
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-27 50
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 50
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-14 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_2319 YP_001362064.1 ABC transporter NC_012469.1.7685735. Protein 3e-18 45
Krad_2319 YP_001362064.1 ABC transporter NC_012469.1.7686878. Protein 6e-24 44
Krad_2319 YP_001362064.1 ABC transporter NC_008702.1.4606598. Protein 2e-17 43
Krad_2319 YP_001362064.1 ABC transporter CP001581.1.gene598.p Protein 1e-24 43
Krad_2319 YP_001362064.1 ABC transporter CP001581.1.gene798.p Protein 3e-21 41