Gene Information

Name : Krad_1806 (Krad_1806)
Accession : YP_001361556.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 427437 - 428114 bp
Length : 678 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: nca:Noca_1613 response regulator receiver

DNA sequence :
GTGCGGGTGCTCCTGGTCGAGGACGAGGTCCTGCTCGCCGACACCGTCCGCCGCGGCCTGGCCGCCGAGGGCGTCGAGGT
CGACCTCGCCCACGACGGGCCCACCGGCTACCGCCGCGCCCGCGAGCACGCCTACGACGTCCTCGTCCTGGACCTCATGC
TCCCCGGGCGCAACGGCTACGAGGTCTGCCGCGACCTGCGCGCGGCGGGGGTGTGGACCCCCGTCCTCGTCCTCACCGCC
AAGGACGGGGAGTACGACCAGGTCGACGCCTTCGACCTCGGCGCCGACGACTACCTCACCAAGCCCTTCTCCTTCCCCGT
GCTGCTGGCCCGCCTGCGGGCCCTGCACCGGCGCGGGGCCCCCGAGCGCCCCGTCGTCCTGCGCGCGGGCGACCTCGTCC
TGGACCCCGCCACCCGCCGCGTGCACCGCGGCGAGACCCCCCTGACCCTCACCGCGCGCGAGTTCGCGCTCCTGGAGTTC
CTGCTGCGCCGCCGCGACGAGGTCGTGCCCAAGGCGGAGATCCTGCGCGCGGTCTGGGACCCCGAGGTGAGCACCGACCC
CAACGTCGTGGAGGTCTACGTCGGCTACCTGCGCCGCAAGGTCGACGCCCCCTTCGCCCGCCACGCCCTGCAGACCGTCC
GCGGCGCCGGCTACCGGCTCGCCGCCGACGGCGGCTGA

Protein sequence :
MRVLLVEDEVLLADTVRRGLAAEGVEVDLAHDGPTGYRRAREHAYDVLVLDLMLPGRNGYEVCRDLRAAGVWTPVLVLTA
KDGEYDQVDAFDLGADDYLTKPFSFPVLLARLRALHRRGAPERPVVLRAGDLVLDPATRRVHRGETPLTLTAREFALLEF
LLRRRDEVVPKAEILRAVWDPEVSTDPNVVEVYVGYLRRKVDAPFARHALQTVRGAGYRLAADGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-24 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_1806 YP_001361556.1 winged helix family two component transcriptional regulator BAC0083 Protein 1e-25 48
Krad_1806 YP_001361556.1 winged helix family two component transcriptional regulator BAC0125 Protein 2e-29 47
Krad_1806 YP_001361556.1 winged helix family two component transcriptional regulator BAC0638 Protein 1e-23 47
Krad_1806 YP_001361556.1 winged helix family two component transcriptional regulator BAC0111 Protein 2e-26 45
Krad_1806 YP_001361556.1 winged helix family two component transcriptional regulator BAC0197 Protein 1e-25 45
Krad_1806 YP_001361556.1 winged helix family two component transcriptional regulator BAC0347 Protein 1e-22 44
Krad_1806 YP_001361556.1 winged helix family two component transcriptional regulator BAC0308 Protein 5e-23 43
Krad_1806 YP_001361556.1 winged helix family two component transcriptional regulator U82965.2.orf14.gene. Protein 4e-17 42
Krad_1806 YP_001361556.1 winged helix family two component transcriptional regulator Y16952.3.orf35.gene. Protein 7e-18 41
Krad_1806 YP_001361556.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 6e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_1806 YP_001361556.1 winged helix family two component transcriptional regulator VFG1390 Protein 2e-29 48
Krad_1806 YP_001361556.1 winged helix family two component transcriptional regulator VFG0596 Protein 9e-25 43
Krad_1806 YP_001361556.1 winged helix family two component transcriptional regulator VFG1386 Protein 7e-23 42