Gene Information

Name : Krad_1869 (Krad_1869)
Accession : YP_001361619.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 358567 - 359397 bp
Length : 831 bp
Strand : -
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ade:Adeh_4155 ABC transporter, ATPase subunit

DNA sequence :
GTGACCGGACCGGGCCCGAGCCTCCCGCGGACCCGCGAGGAGCCCCACGACCAGACCCACGACCAGACCCACGACCAGAC
CCACGACCAGGAGCACGCGCTGACCCCCGCTCCCGAGGCGCGCCCGGCGGCGCGCGCGGCCGCCATCGAGGCGGTCGAGG
TGACCCGGTCCTACCGGTTCGGCGACACCACCGTGGACGCGCTGCGCGGGGTCAGCTTCACCGTGGCCGAGGGGGAGTAC
ACCGCGATCGTGGGCCCCAGCGGTTCGGGGAAGTCGACGCTGATGCACCTGCTGGGCTGCCTGGACCGGCCCACCTCGGG
GGTCCTGCGGGTCGGCGGCCGCGACGTCGCCACCCTCTCCGACGCGGAGCTGGCCCAGCTGCGCAACCAGGAGATCGGGT
TCGTCTTCCAGGCCTTCCAGCTGCTCCCGCGCTCCAGCGCGATGGACAACGTGGCCCTGCCGCTGCTGTACCGCGGGGTG
AAGGCGCCCGAGCGCCGGGAGCTGGCGGCGGCGGCGCTGCGGTCGGTGAACCTGGGGCACCGCCTCACCCACCGGCCCAC
CCAGATGTCCGGCGGTGAGCAGCAGCGGGTGGCGATCGCGCGGGCCCTGGTGGGGAGCCCGCGGATCCTGCTGGCCGACG
AGCCGACGGGCAACCTGGACACGAAGAACGGCGCGGAGGTCATGCGCATCCTCGAGGAGCTGAACTCCGAGCGCGGGGTG
GCGGTGGTCCTGGTCACCCACGACGACGAGGTGGCCGCCCGCGCCCGGCGGCAGGTGCGGGTCCGCGACGGCCTCATCGA
GCGCGACACCGCGGCGGGAGGCGGGGCGTGA

Protein sequence :
MTGPGPSLPRTREEPHDQTHDQTHDQTHDQEHALTPAPEARPAARAAAIEAVEVTRSYRFGDTTVDALRGVSFTVAEGEY
TAIVGPSGSGKSTLMHLLGCLDRPTSGVLRVGGRDVATLSDAELAQLRNQEIGFVFQAFQLLPRSSAMDNVALPLLYRGV
KAPERRELAAAALRSVNLGHRLTHRPTQMSGGEQQRVAIARALVGSPRILLADEPTGNLDTKNGAEVMRILEELNSERGV
AVVLVTHDDEVAARARRQVRVRDGLIERDTAAGGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-20 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_1869 YP_001361619.1 ABC transporter NC_012469.1.7686878. Protein 1e-44 54
Krad_1869 YP_001361619.1 ABC transporter CP001581.1.gene798.p Protein 2e-34 44