Gene Information

Name : Krad_3272 (Krad_3272)
Accession : YP_001363000.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3713128 - 3714651 bp
Length : 1524 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: sma:SAV7177 aldehyde dehydrogenase

DNA sequence :
ATGACGGTCTACGAGGCGCCCGGGCGCGCCGGCAGCGTCGTGCAGTACGCCGACCGCTACGACCACTGGATCGGCGGCGA
GCGCGTCGCCCCCGCCGAGGGCGGGTACTTCGAGAACCCCAGCCCCGTCACCGGCCAGCCGTTCACCGAGGTCGCCCGCG
GTACCGCCGCCGACGTCGAGCGCGCCCTGGACGCCGCCCACGCCGCCGCGCCGGCCTGGGGCCGCACCTCCGTCGCCGAG
CGGGCCCTGGTGCTGAACCGCATCGCCGACCGGATCGAGCAGAACCTGGAGGAGCTCGCCGTCGCGGAGACCTGGGACAA
CGGCAAGCCCGTGCGGGAGTGCCTCGCCGCGGACCTGCCCCTCGTCGTGGACCACCTGCGCTACTTCGCCGGGGTCGTGC
GGGCGCAGGAGGGCGGGATCTCCCAGATCGACGACGACACCGTCGCCTACCACTTCCACGAACCGCTGGGGGTCGTCGGG
CAGATCATCCCGTGGAACTTCCCGCTGCTCATGGCGATCTGGAAGCTGGCCCCGGCGCTCGCGGCCGGCAACGCCGTCGT
GCTCAAGCCCGCCGAGCAGACCCCGGCCTCGATCATGCTGCTGATGGACCTCGTCGGGGACCTGCTCCCGCCCGGCGTCG
TCAACGTCGTCAACGGGTTCGGCGCGGAGGCGGGCAAACCGCTGGCCAGCAACCCCCGCATCCGCAAGATCGCCTTCACG
GGCGAGACGACGACGGGCCGGCTGATCATGCAGTACGCCAGCCAGAACCTCATCCCCGTGACCCTGGAACTGGGCGGCAA
GAGCCCGAACGTCTTCTTCGACGACGTCGCCAGCGCCCGGGACGACTTCTACGACAAGGCCCTCGAGGGGTTCACGATGT
TCGCCCTCAACCAGGGGGAGGTGTGCACCTGCCCGTCCCGCGCGCTCATCCAGAGCGGCATCTACGAGTCGTTCCTCGCC
GACGCGCTGGACCGCACCCGGGCCGTGAAGCAGGGCAACCCGCTGGACACCGAGACGATGATCGGGGCGCAGGCCAGCAA
CGACCAGCTCGAGAAGATCCTCTCCTACATCGACATCGGGAAGCAGGAGGGCGCGAAGCTGCTGACCGGGGGCGAGCGCG
CCGACCTCGGGGGGGAGCTGTCCGGCGGCTACTACGTGACGCCGACGGTGTTCGAGGGCGACAACTCGATGCGCATCTTC
CAGGAGGAGATCTTCGGGCCCGTCGTCTCCGTGACCCGCTTCGACGGCCCGGACGACGCGCTGAAGATCGCCAACGACAC
CCTCTACGGCCTGGGGGCGGGCGTGTGGTCGCGCGACATCCACCTCGCGTACCGGATGGGGCGCGGGATCCAGGCCGGGC
GGGTGTGGACGAACAACTACCACGCCTACCCCGCGCACGCGGCGTTCGGCGGGTACAAGAGCTCCGGCATCGGCCGGGAG
AACCACGCCATGATGCTCGACCACTACCAGCAGACGAAGAACCTCCTCGTCAGCTACTCCACCAGCAAGCTCGGGTTCTT
CTGA

Protein sequence :
MTVYEAPGRAGSVVQYADRYDHWIGGERVAPAEGGYFENPSPVTGQPFTEVARGTAADVERALDAAHAAAPAWGRTSVAE
RALVLNRIADRIEQNLEELAVAETWDNGKPVRECLAADLPLVVDHLRYFAGVVRAQEGGISQIDDDTVAYHFHEPLGVVG
QIIPWNFPLLMAIWKLAPALAAGNAVVLKPAEQTPASIMLLMDLVGDLLPPGVVNVVNGFGAEAGKPLASNPRIRKIAFT
GETTTGRLIMQYASQNLIPVTLELGGKSPNVFFDDVASARDDFYDKALEGFTMFALNQGEVCTCPSRALIQSGIYESFLA
DALDRTRAVKQGNPLDTETMIGAQASNDQLEKILSYIDIGKQEGAKLLTGGERADLGGELSGGYYVTPTVFEGDNSMRIF
QEEIFGPVVSVTRFDGPDDALKIANDTLYGLGAGVWSRDIHLAYRMGRGIQAGRVWTNNYHAYPAHAAFGGYKSSGIGRE
NHAMMLDHYQQTKNLLVSYSTSKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-136 62
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-142 61
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-142 61
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-142 61
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-142 61
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_3272 YP_001363000.1 aldehyde dehydrogenase VFG0082 Protein 5e-137 62