Gene Information

Name : Krad_3778 (Krad_3778)
Accession : YP_001363505.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3144845 - 3145546 bp
Length : 702 bp
Strand : +
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: blo:BL1277 ATP-binding protein of ABC transporter system

DNA sequence : 
ATGGACATCCTCACCGCCCGGGGTCTGGTCATGACCTACGGGAGCACCCGCGCCCTCGACGGCGTCGACGTCACCGTGCG
GGCCGGCGAGTCGGTCGCCGTGATGGGCCCCTCGGGGTCGGGCAAGACGACGCTGCTGCACGTCCTGGCCGGGGTGCTGC
GCCCCACCTCCGGCACGGTCGACCTCGCCGGGACCGACCTGGTCGCGCTGAGCGACGCGCAGCGCACCCGGCTGCGCCGC
GACGACTTCGGCTTCGTCTTCCAGTCCGGGCAGCTGCTGGCCGAGCTGCCCGCCGACGAGAACGCCGCCCTGCCCCTCCT
GCTGGCCGGGCGCCCGCGGGCGGCCGCCACGGCGCGCGCCCGGGAGCTGCTGGCCCGGCTGGGGCTCGCGGGGATGGAGC
GCCGCCGCCCGGGGGAGCTGTCGGGCGGGCAGGCCCAGCGGGTCGCCATCGCCCGGGCGCTGGTCGGCTCGCCCTCGGTC
GTCTTCGCCGACGAGCCCACCGGCGCCCTGGACCAGGCCACCGGCCGCGAGGTCCTGGACCTGCTCACCTCCGCCGCCCG
GGCCGGCGGGGCCGCCCTCGTCGTCGTCACCCACGACCCCGGCGTGGCCCGCTGGTGCGACCGGACCCTGGCCATGCGCG
ACGGCCGCGTCGTCGGCGAGTTCCGCGCTCCCGCCCCGCAGCACCAGGTGCCCCTCCCGTGA

Protein sequence : 
MDILTARGLVMTYGSTRALDGVDVTVRAGESVAVMGPSGSGKTTLLHVLAGVLRPTSGTVDLAGTDLVALSDAQRTRLRR
DDFGFVFQSGQLLAELPADENAALPLLLAGRPRAAATARARELLARLGLAGMERRRPGELSGGQAQRVAIARALVGSPSV
VFADEPTGALDQATGREVLDLLTSAARAGGAALVVVTHDPGVARWCDRTLAMRDGRVVGEFRAPAPQHQVPLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-23 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-23 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_3778 YP_001363505.1 ABC transporter NC_008702.1.4606598. Protein 5e-25 47
Krad_3778 YP_001363505.1 ABC transporter NC_012469.1.7686878. Protein 9e-27 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_3778 YP_001363505.1 ABC transporter VFG2059 Protein 2e-07 42