Gene Information

Name : Krad_1963 (Krad_1963)
Accession : YP_001361713.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 264771 - 265517 bp
Length : 747 bp
Strand : -
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: sma:SAV3634 ABC-transporter ATP-binding protein

DNA sequence : 
ATGTCGACGACCGCCCTCTCCCGCACCACTGCCGCGGTCTCCCTGGAGGCCGTCAGCAAGACCTACGGCACCGGCCCCAC
GGCCGTGCGCGCCGTGGACGGCGTGGACGTGGACTTCGCGCCCGGTACCTGGACGGCCGTCATGGGCCCCTCCGGCTCGG
GGAAGTCCACCCTGCTCAACTGCGCCGCTGGGCTGGAACACGTGGACGCCGGACGGGTCCTGCTCGGGGACACCGACATC
ACCGACGCCGACGACGAGGAGCTCTCCGCCCTGCGGCGCACCCGCATCGGGTTCGTCTTCCAGAGCTTCAACCTCGTCTC
CTCCCTGAGCGCGGCGCAGAACGTCGAACTGCCCCTGCGCCTGAGTGGACGGCGACCCGGCCGCGAGCAGGTGCTGCAGG
CGCTGGCCGCGGTCGGCCTGGCCGAGCGCGCCGACCACCGTCCCCGCCAGCTCTCCGGCGGGCAGCAGCAGCGCGTGGCC
ATCGCCCGCGCGATGGTCACCGCCCCGGAGGTCCTCTTCGCCGACGAGCCGACCGGTGCGCTGGACTCCACCGCCGCGCG
CGGGGTCCTCGACCTCATGCGCACCACCGTCAGCGCGGGTCAGACCATCGTCATGGTCACCCACGACCCGGCCGCCGCTG
CGCGCGCGGACGCGACGGTGTTCCTGCGCGACGGCCGGATCGTGGACCGCCTCGCCGGTGCGGACGCCGCCACCGTCGCC
GCCCGCCTCGTCTCGCTGGAGGGCTGA

Protein sequence : 
MSTTALSRTTAAVSLEAVSKTYGTGPTAVRAVDGVDVDFAPGTWTAVMGPSGSGKSTLLNCAAGLEHVDAGRVLLGDTDI
TDADDEELSALRRTRIGFVFQSFNLVSSLSAAQNVELPLRLSGRRPGREQVLQALAAVGLAERADHRPRQLSGGQQQRVA
IARAMVTAPEVLFADEPTGALDSTAARGVLDLMRTTVSAGQTIVMVTHDPAAAARADATVFLRDGRIVDRLAGADAATVA
ARLVSLEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 48
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_1963 YP_001361713.1 ABC transporter NC_008702.1.4606598. Protein 1e-30 44
Krad_1963 YP_001361713.1 ABC transporter CP001581.1.gene798.p Protein 1e-31 44
Krad_1963 YP_001361713.1 ABC transporter CP001581.1.gene598.p Protein 4e-33 43
Krad_1963 YP_001361713.1 ABC transporter NC_012469.1.7686878. Protein 3e-32 42