Gene Information

Name : Krad_4216 (Krad_4216)
Accession : YP_001363943.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2665374 - 2668010 bp
Length : 2637 bp
Strand : +
Note : PFAM: ATPase AAA; Clp domain protein; ATPase activities AAA_5; ATPase AAA; SMART: AAA ATPase; KEGG: aau:AAur_3531 ClpA/ClpB family protein

DNA sequence :
GTGGACCTCAAGCTCACCACCCGCGCCCAGGAGGCCCTGGCCGACGCCGTCGGGCGCGCCACGTCCGCCGGGCACGCGCA
GGTCGAACCCCTCCACGTCCTCGCCGCCCTGCTCGGGCAGGACAACGGCGTCGCCGGTCACCTGCTCGCCGCCCTCGGGG
CCGACCAGGCCCTCCTCACCCGCCGGATCGACGGCGCGCTCTCCTCGCTGCCCAGCGCCTCCGGCTCCAACGTCAGCCAG
CCCCAGCTCTCCCGCCCCGCCCTGCAGCTCATGCAGGCCGCCGGGGACGAGGCCCGCGCCCTCGACGACGCCTACGTCTC
CACCGAGCACCTGCTCCTCGGGGCCGCCGCCTCCCCCTCCGCCGCCGGCGAGGCCCTGCGCGCCGTCGGCGCCACCCGCG
ACGCCCTCCTCGACTCCCTGCCCACCGTGCGCGGCGGCGCCAAGGTCACCTCCCCCGACCCCGAGGGCACCTACCGGTCG
CTGGAGAAGTACGGCGTCGACCTCACCGAGCAGGCCCGCCAGGGCCGCCTCGACCCCGTCATCGGCCGCGACGCCGAGAT
CCGCCGCGTCGTGCAGGTGCTCTCGCGGCGCACCAAGAACAACCCCGTCCTCATCGGGGAACCCGGCGTCGGCAAGACCG
CCGTCGTCGAGGGCCTCGCCCAGCGCATCGTCGCCGGCGACGTCCCCGAGTCCCTGCGCGGCAAGCGGCTGATCTCCCTC
GACCTCGCCAGCATGGTCGCCGGGGCGAAGTACCGCGGCGAGTTCGAGGAACGCCTCAAGGCCGTCCTGCAGGAGATCCA
GGACTCCGACGGGCAGGTCGTCACCTTCATCGACGAGCTGCACACCGTCGTCGGCGCCGGCGCCGGCGAAGGCGCCATGG
ACGCGGGCAACATGCTCAAGCCCATGCTCGCCCGCGGCCAGCTCCGCCTCGTCGGGGCGACCACCCTCGACGAGTACCGC
GAGCGCATCGAGAAGGACCCCGCCCTCGAACGCCGCTTCCAGCAGGTCTTCGTCGGTGAACCCTCGGTGCCCGACACCAT
CGGCATCCTGCGCGGGCTGCGCGAGCGCTACGAGGCCCACCACAAGGTCGCGATCTCCGACGCCGCCCTCGTCGCCGCCG
CGACCCTGTCCGACCGCTACATCAGCGGCCGGCAGCTGCCCGACAAGGCCATCGACCTCGTCGACGAGGCCGCGTCCCGG
CTGCGCATGGAGATCGACTCCTCGCCCGTCGAGATCGACGAGCTCCGCCGCGCCGTGGACCGGATGAGGATGGAGGAGCT
CGCCCTCAGCAAGGAGGAGGACGCCGCCAGCCGCAACCGCCTGGAGACCCTGCGCGCCCAGCTCGCCGACAAGCAGGAGC
AGCTCACCGCCCTCACCGCGCGCTGGGAGCAGGAGAAGGCCGGCCTCAACCGGGTCGGCGACCTCAAGCACCAGGTCGAC
GAGCTGCGCTCGCAGGCCGAGCGCCTGCAGCGCGAGGGCGACCTCGGGCGGGCCAGCGAGATCCTCTACGGCCGCATCCC
CGCGCTGGAGGCGGAACTGCGCCAGGCCCAGGCCGCCGAGCAGGACGCCCCCGCCCAGGCCCCGATGGTCGCCGACGAGG
TCGGCCCCGACGACATCGCCGAGGTCATCGCCGGCTGGACGGGCATCCCCGCCGGCCGGATCCTCGAGGGCGAGACCGAG
AAGCTGCTGCGCATGGAGGAGTTCCTCGGCGCCCGCCTCATCGGCCAGACCACCGCGGTGCAGGCGGTCTCCGACGCCGT
CCGGCGCTCGCGGGCCGGGGTCAACGACCCCGACCGCCCCACCGGCTCGTTCCTCTTCCTCGGCCCCACCGGCGTCGGCA
AGACGGAACTCGCGAAGGCGCTCGCGGACTTCCTCTTCGACGACGAGCGGGCCATGGTCCGCATCGACATGAGCGAGTAC
TCCGAGAAGCACGCCGTCGCCCGCCTCGTCGGGGCCCCTCCGGGCTACGTCGGCTACGAGGAGGGCGGCCAGCTCACCGA
GGCCGTCCGGCGCCGGCCCTACTCCGTCGTGCTGCTCGACGAGGTGGAGAAGGCCCACCCGGAGGTGTTCGACATCCTCC
TGCAGGTCCTCGACGACGGGCGCCTGACCGACGGCCAGGGCCGCACGGTGGACTTCCGCAACGTCATCCTGGTGCTGACC
TCGAACCTCGGGTCGCAGTACCTGGTCGACCCGGAGCTCTCGCAGGCCACCAAGCACGACGCCGTCATGACCGCGGTCCG
GGCGAACTTCAAGCCGGAGTTCCTCAACCGCCTCGACGACGTCGTCGTGTTCGACCCGCTGTCCACGCAGGAGCTGTCCC
GGATCGTCGAGATCCAGGTGCAGCGCCTCGCCGACCGCCTCGCCGACCGCCGCTTCGTCCTCGACGTCTCCGACGCCGCG
AAGGACTGGCTGGCCCTCACCGGCTACGACCCCGCCTACGGGGCGCGGCCGCTGCGCCGGCTGGTGCAGCGCGAGATCGG
CGACAAGCTCGCCCGCGCGATCCTCTCCGGGGAGGTCCGCGACGGCGACACCGTCGAGGTCGACGTCGCCCGCGGCAGCT
TCGACCTGGACGACCCGGCCTCGGCCGGGACGAACGGCCTCGTCGTCCGGCGGGCGGAGACGGCGCTGACCGTCTGA

Protein sequence :
MDLKLTTRAQEALADAVGRATSAGHAQVEPLHVLAALLGQDNGVAGHLLAALGADQALLTRRIDGALSSLPSASGSNVSQ
PQLSRPALQLMQAAGDEARALDDAYVSTEHLLLGAAASPSAAGEALRAVGATRDALLDSLPTVRGGAKVTSPDPEGTYRS
LEKYGVDLTEQARQGRLDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPESLRGKRLISL
DLASMVAGAKYRGEFEERLKAVLQEIQDSDGQVVTFIDELHTVVGAGAGEGAMDAGNMLKPMLARGQLRLVGATTLDEYR
ERIEKDPALERRFQQVFVGEPSVPDTIGILRGLRERYEAHHKVAISDAALVAAATLSDRYISGRQLPDKAIDLVDEAASR
LRMEIDSSPVEIDELRRAVDRMRMEELALSKEEDAASRNRLETLRAQLADKQEQLTALTARWEQEKAGLNRVGDLKHQVD
ELRSQAERLQREGDLGRASEILYGRIPALEAELRQAQAAEQDAPAQAPMVADEVGPDDIAEVIAGWTGIPAGRILEGETE
KLLRMEEFLGARLIGQTTAVQAVSDAVRRSRAGVNDPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEY
SEKHAVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILVLT
SNLGSQYLVDPELSQATKHDAVMTAVRANFKPEFLNRLDDVVVFDPLSTQELSRIVEIQVQRLADRLADRRFVLDVSDAA
KDWLALTGYDPAYGARPLRRLVQREIGDKLARAILSGEVRDGDTVEVDVARGSFDLDDPASAGTNGLVVRRAETALTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-103 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_4216 YP_001363943.1 ATPase AAA VFG2076 Protein 1e-112 45
Krad_4216 YP_001363943.1 ATPase AAA VFG2084 Protein 2e-106 43