Gene Information

Name : Krad_4405 (Krad_4405)
Accession : YP_001364128.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2443891 - 2444565 bp
Length : 675 bp
Strand : +
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: sco:SCO3752 ABC transporter ATP-binding protein

DNA sequence : 
GTGGAACTGGACCACGTCACCCGCGCCCACCCCGGGGGGATCGTCGCCCTGCGCGACGTCTCGCTGCGGGTGCCGCGCGG
GCAGTTCCTGGCCGTCACCGGGTCCTCCGGTTCCGGCAAGAGCACGCTGCTGCAGTGCGCCGCGGGCCTCGACGTCCCCA
CCAGCGGCCGCGTCCGCCTCGCCGGCACCGACCTGACCGGGCTCGGCGAGACCGCCCGCACCCGGTTGCGCCGCGACCGC
GTCGGGTTCGTGTTCCAGGCCTACAACCTGCTGCCCGCGCTCACCGTCGCCGACAACATCACCCTGCCGCTGCGACTCGC
CGGGCGCGCCCCGGACGTCGAGCGGGTCCGCCGGCTCGTCGACCGCGTCGGGCTGGGCGACCGGCTCGGGCACCACCCGG
CGGAACTGTCCGGCGGTCAGCAGCAGCGGGCGGCCATCGTCCGCGCCCTGGTCACCGACCCCGCCGTGGTCTTCGCCGAC
GAACCCACCGGGGCGCTGGACCCGCGCACGGGCGCCGCGGTGCTGGACCTGCTGCGCGACCTGGTCACCGAGCTCGGGCA
GACCGTCGTCATGGTCACCCACGACCCCGCCGCCGCCTCCCGCGCCCACCGCACGCTCGTGGTCGAGGACGGCCGCATCA
CCGACGACCGCACCACCGACGACGAGGGGAACTGA

Protein sequence : 
MELDHVTRAHPGGIVALRDVSLRVPRGQFLAVTGSSGSGKSTLLQCAAGLDVPTSGRVRLAGTDLTGLGETARTRLRRDR
VGFVFQAYNLLPALTVADNITLPLRLAGRAPDVERVRRLVDRVGLGDRLGHHPAELSGGQQQRAAIVRALVTDPAVVFAD
EPTGALDPRTGAAVLDLLRDLVTELGQTVVMVTHDPAAASRAHRTLVVEDGRITDDRTTDDEGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 48
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-31 47
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-14 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 9e-15 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_4405 YP_001364128.1 ABC transporter NC_008702.1.4606598. Protein 5e-32 50
Krad_4405 YP_001364128.1 ABC transporter CP001581.1.gene598.p Protein 4e-32 46
Krad_4405 YP_001364128.1 ABC transporter CP001581.1.gene798.p Protein 2e-33 43
Krad_4405 YP_001364128.1 ABC transporter NC_012469.1.7686878. Protein 9e-34 43