Gene Information

Name : Krad_0443 (Krad_0443)
Accession : YP_001360197.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1851661 - 1852434 bp
Length : 774 bp
Strand : -
Note : PFAM: ABC transporter; SMART: AAA ATPase

DNA sequence :
GTGACGCTGCGCGCCGAGGCGGTGAGCTGGGACCGCGGGGGCAACCTCGTGGTGGACGGGGTGAGCCTGGCCCCCGCCCC
CGGGCAGACGGTGGCCCTGCTGGGGCCCAACGGGTCCGGCAAGTCCTCCCTGCTGCGCCTGCTCGACGGCGTGGTGCGCC
CGACGTCGGGGGTCGTCACCCTCGACGGGGAGGACCTCGCCCGCGTCCCCCGCCGGGAGGCCGCGCGCGCCGTCGCCGTC
GTCGGGCAGCAGAGCAGCACCGAGGTCGACCTGACCGTCCGCGACGTCGTGGAACTGGGCCGGCTGCCGCACCGCACGAC
CTTCGGCGGCGACCGCGCCGCCGACGCCCGGGCCGTGGCGGAGGCGCTGCGCTGCACCGGGTTGACCGACAAGGCCGACC
GCCTGTGGCGGAAGCTGTCCGGCGGGGAGCAGCAGCGCGCCCACATCGCGCGGGCGCTGGCCCAGGAACCCCGGGAACTG
CTGCTGGACGAACCCACCAACCACCTCGACATCCGCCACCAGCTCGACGTGCTGGCCCTGGTGACCCGGCTGCCGGTGAC
GACGGTCGTCGCGCTGCACGACCTCAACCTCGCCGCGATGTTCTGCGACGCGGTCCTCGTGCTGCGCGAGGGCCGGGTGG
TGGCCGGGGGGACCCCCGCCGACGTCCTCACCCCCGAGCTGATCGCCGAGGTGTACGGGGTGCGGGCCGAGGTGAGCCTG
GACCCGCGCGACGGGCGGCCCGCGATCCGGTTCCTGCCCGGCGTCCCGGTCTGA

Protein sequence :
MTLRAEAVSWDRGGNLVVDGVSLAPAPGQTVALLGPNGSGKSSLLRLLDGVVRPTSGVVTLDGEDLARVPRREAARAVAV
VGQQSSTEVDLTVRDVVELGRLPHRTTFGGDRAADARAVAEALRCTGLTDKADRLWRKLSGGEQQRAHIARALAQEPREL
LLDEPTNHLDIRHQLDVLALVTRLPVTTVVALHDLNLAAMFCDAVLVLREGRVVAGGTPADVLTPELIAEVYGVRAEVSL
DPRDGRPAIRFLPGVPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-38 47
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 5e-29 44
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-29 44
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-29 44
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 3e-29 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-28 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_0443 YP_001360197.1 ABC transporter VFG0925 Protein 2e-29 42