Gene Information

Name : Krad_1017 (Krad_1017)
Accession : YP_001360769.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 1254974 - 1257076 bp
Length : 2103 bp
Strand : -
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase subunit B; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rha:RHA1_ro01231 potassium-transporting ATPase B c

DNA sequence :
GTGAGCACCCTCACCGAGAAACCCCTCCCGCCGGACACCGCCGCCCCCGAACCGCACCGCGTCCCCGGCGGGGCGTTCAG
CCCCCGCCAGCTCGTCGCCGCGGTGCCCGGCGCGTTCCGCAAGCTCGACCCGCGCCACCTCGTCCGCACCCCGGTGATGT
TCGTCGTCGCCCTCGGCGCCGTCCTCACCACCGCGCTCGCGGTCACCGACCCGTCGGTGTTCGCGTGGGTCATCGTCGCC
TGGCTGTGGATCACCGTCCTCTTCGCGAACCTGGCCGAGGCCGTCGCCGAGGGGCGCGGGCGGGCGCAGGCCGCGTCGCT
GCGCCGGGTGAGCGCGGAGACCGTCGCGCGCCGGCTGACCGAGGGCCGGGAGGAGCGCGTCGCCTCCAGCCGGCTGCGCG
TGGGCGACCTCGTCGTCGTCGAGGCCGGCGAGACCGTCCCCGGCGACGGCGACGTCGTCGAGGGCGTCGCCAGCGTCGAC
GAGTCGGCCATCACCGGGGAGTCCGCTCCCGTCGTCCGCGAGTCCGGCGGCGACCGCAGCGCCGTCACCGGCGGCACCAC
CGTCCTCTCCGACCGGATCGTCGTGCGGGTCACGGCCAAACCGGGTGAGAGCTTCGTGGACCGGATGATCGCCCTCGTCG
AGGGCTCCGCCCGCCAGCGCACCCCCAACGAGATCGCGCTGAACATCCTGCTGTCCGGCCTGACCCTGGTGTTCCTGCTC
GCCGTCGTGACCCTGCAGCCGATGGCGGTCTACTCCGGGCGCCCCCAGCCGCTGGTCGTGCTGGTCGCCCTGCTGGTCTG
CCTCATCCCCACCACCATCGGGGCGCTGCTCTCGGCCATCGGCATCGCCGGCATGGACCGCCTGGTGCAGCGCAACGTCC
TGGCGATGTCGGGACGCGCCGTCGAGGCCGCCGGCGACGTGGGGACCCTGCTGCTGGACAAGACCGGCACCATCACCCTC
GGCAACCGGCAGGCCCACGAGCTCGTCCCCGCCCCGGGCGTGGACCCCGCCGAGCTCGCCGACGCCGCCCGGCTCTCCAG
CCTCGCCGACACCACCCCCGAGGGCCGCTCGATCGTGGTCCTCGTGGAGGAGCGCCAGGGGGTGGCCGCCCACCCCGCGG
ACCTCGGCGCCACGCCCGTCCCGTTCACCGCCCAGACCCGCATGTCCGGGGTCGACCTGACCACCGGCCGGGGGGAGCGG
CGGATCCGCAAGGGGGCCGCCGCGGCGACGGCGCACTGGGTCCGAGGGCTCGGCGGCGACGTCCCCCGCGAGGTCGAGCG
GGCCGTGGAGGACATCTCCACCGTCGGCGGGACCCCGCTGGTCGTGGCGGAGGACGTCACGACGGGTTCCGGGTCGCGGG
CCCGCGTCCTCGGCGTCGTCCACCTCAAGGACGTCGTCAAGGAGGGGATGCGCGAACGCTTCGCGCAGCTGCGGGCCATG
GGGATCCGCACCGTCATGGTCACCGGCGACAACGCCCGCACCGCCGCCGCCATCGCCGCCGAGGCCGGGGTCGACGACGT
GCTCGCCGAGGCCACGCCGGAGGACAAGCTGGACCTCATCCGCCGCGAGCAGTCCGGCGGGCGCCTGGTGGCGATGATGG
GCGACGGCACCAACGACGCCCCCGCCCTGGCCCAGGCCGACGTCGGGGTCGCGATGAACACCGGCACCTCGGCCGCCAAG
GAGGCCGGGAACATGGTCGACCTGGACTCCGACCCGACGAAGCTCATCGAGATCGTCGAGATCGGCAAGCAGCTGCTCAT
CACCCGCGGCGCGCTCACCACGTTCTCCATCGCCAACGACGTCGCGAAGTACTTCGCCATCCTCCCGGCGATGTTCGTCA
CCACGTTCCCGCAGCTCGGCGCGCTCAACGTCATGCGGCTGGCCACGCCGGAGTCCGCGATCGTCTCCGCGGTCGTCTTC
AACGCCCTCGTCATCGTGGCGCTCATCCCCCTCGCCCTGCGCGGGGTGCGCTACCGGCCCTCCGGCGCCGCGGCCCTGCT
GCGCCGCAACCTGCTCGTGTACGGCCTCGGCGGCGTCGCCGTGCCGTTCCTGGGCATCAAGCTCGTCGACCTGCTCGTCT
CCCAGATCCCAGGAATCGGCTGA

Protein sequence :
MSTLTEKPLPPDTAAPEPHRVPGGAFSPRQLVAAVPGAFRKLDPRHLVRTPVMFVVALGAVLTTALAVTDPSVFAWVIVA
WLWITVLFANLAEAVAEGRGRAQAASLRRVSAETVARRLTEGREERVASSRLRVGDLVVVEAGETVPGDGDVVEGVASVD
ESAITGESAPVVRESGGDRSAVTGGTTVLSDRIVVRVTAKPGESFVDRMIALVEGSARQRTPNEIALNILLSGLTLVFLL
AVVTLQPMAVYSGRPQPLVVLVALLVCLIPTTIGALLSAIGIAGMDRLVQRNVLAMSGRAVEAAGDVGTLLLDKTGTITL
GNRQAHELVPAPGVDPAELADAARLSSLADTTPEGRSIVVLVEERQGVAAHPADLGATPVPFTAQTRMSGVDLTTGRGER
RIRKGAAAATAHWVRGLGGDVPREVERAVEDISTVGGTPLVVAEDVTTGSGSRARVLGVVHLKDVVKEGMRERFAQLRAM
GIRTVMVTGDNARTAAAIAAEAGVDDVLAEATPEDKLDLIRREQSGGRLVAMMGDGTNDAPALAQADVGVAMNTGTSAAK
EAGNMVDLDSDPTKLIEIVEIGKQLLITRGALTTFSIANDVAKYFAILPAMFVTTFPQLGALNVMRLATPESAIVSAVVF
NALVIVALIPLALRGVRYRPSGAAALLRRNLLVYGLGGVAVPFLGIKLVDLLVSQIPGIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 2e-148 59
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 2e-148 59
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 8e-133 54
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 8e-133 54
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 8e-133 54
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 8e-133 54
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 4e-133 54
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 6e-133 54