Gene Information

Name : Krad_1084 (Krad_1084)
Accession : YP_001360836.1
Strain : Kineococcus radiotolerans SRS30216
Genome accession: NC_009664
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1179153 - 1179920 bp
Length : 768 bp
Strand : +
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: sdn:Sden_2367 ABC transporter

DNA sequence : 
ATGGAGGGGACCTCCGCACCGAGCACGCCCGTCACCACCGCCGACGACGTCGTCTCCCTGACCGACGTCAGCCGGACGGT
GCGCCTGCCCGACGGCGAGGACCTGCACATCCTCACCGGGGTGAACCTGCACATCGCCCGCGGCGAGCACGTCGCCGTCG
TGGGCCGGTCCGGGTCGGGCAAGTCGACCCTGCTGAACATCGTCGGGCTGCTCGACGCCCCCACCGGCGGCCGGTACCTG
CTCGACGGGAGACCCGTCTCGGGACTGTCCGCCCGCCGCACGGCGAAGCTGCGCGGGCAGACGTTCGGCTTCGTCTTTCA
GCAGTTCAACCTGCTGCCCGGGCGCACCGCGACGGAGAACGTCGCCAACCCGCTGATGTACGCCGGCGGCCGCGACTTCC
TGCATCGCAAGCGGACCGCGCGCGCCATGCTGGAACGCGTCGGGCTGGGCCACCGCCTCGACACCATGCCCGAGAAGCTG
TCCGGCGGTGAGCAGCAGCGCGTCGCATTGGCGCGCAGCCTGGTCCGGCGCCCCCGCGTCCTGTTGGCCGACGAACCCAC
CGGCGCCCTCGACGTCGACACCGGTTCCGCCGTCATGGACGTGCTCGAGGAACTCGTCCGCGACGACGGCACGACGCTGG
TCACCATCACCCACGACCTGTCGGTCGCCGCCCGCGCCGACCGGCGGTTCCGCCTCGACCACGGCGTCCTCACCGAGATC
ACCGCCGACGCCCTGGCGGCGGCCACCGCGCACCGGGAGACGGTGTGA

Protein sequence : 
MEGTSAPSTPVTTADDVVSLTDVSRTVRLPDGEDLHILTGVNLHIARGEHVAVVGRSGSGKSTLLNIVGLLDAPTGGRYL
LDGRPVSGLSARRTAKLRGQTFGFVFQQFNLLPGRTATENVANPLMYAGGRDFLHRKRTARAMLERVGLGHRLDTMPEKL
SGGEQQRVALARSLVRRPRVLLADEPTGALDVDTGSAVMDVLEELVRDDGTTLVTITHDLSVAARADRRFRLDHGVLTEI
TADALAAATAHRETV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-34 43
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-18 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Krad_1084 YP_001360836.1 ABC transporter NC_008702.1.4606598. Protein 1e-35 49
Krad_1084 YP_001360836.1 ABC transporter NC_012469.1.7686878. Protein 1e-45 45
Krad_1084 YP_001360836.1 ABC transporter CP001581.1.gene598.p Protein 8e-31 41