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Name : Krad_1156 (Krad_1156) Accession : YP_001360908.1 Strain : Kineococcus radiotolerans SRS30216 Genome accession: NC_009664 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1097268 - 1099043 bp Length : 1776 bp Strand : + Note : PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: ace:Acel_2090 type II secretion system protein E DNA sequence : GTGACGACTCTCGACGCCCCCGCCACGTCGACGGGACAGGTCCCGCTCCAGCCGGTCCCGGCCCAGGGCCAGCCCGCGAC CCCCGTGCGCCGGCGCCTGGGGGACGTGCTCGTCGAGAAGGGTCTGCTGGTCCCCGAGGACCTCGACGTCGCCCTGGCCG AGCAGCGCAACGTGGAGGGCCCGCGCCGCCGCCTGGGTCAGATCCTCGTCGAGCTCGGCATGGTCTCCGAGGCCGAGCTG GCCCAGTGCCTGGCCGAGCTGCTGCAGCTGGAGCACGTGGACCTGTCCCGGCTGACCCTGGCCCCCGACGTCGTGCGCCT GCTGCCGCGGGCGGTGGCCGAGCGCTGCCGCGTCCTGGTCCTGGACAAGACCCCGGAGTACCTGCTGGTCGCGGCCGCGG ACCCGACGAACGTCCTGGCCCTGGACGACGTCAAGCTCTACACCCGCACGCCCGAGCTGCACGTCGTCGTGGCGATGGAC TCCCAGATCCGCGACCAGCTGGCCCGCGCCTGGTCGCTGACCGAGGACACCTCGCAGGTGTCGCGGATGGTGCAGGACGC CACCGAGGACGACGACGAGGACCCGCTGGCGGCCCTCAACGGCTCCGTCGACGACGACGCGCCCATCGTCAAGCTCGTCA ACCGGATCCTCTCCGACGCGGTGCGCCTGCGCTGCTCCGACATCCACCTGGAGTCCCAGCGCGACCAGCTGCGCGTCCGC TTCCGCGTCGACGGCCTGCTGCGCGACGTGATGTCCGCGCCCAAGCGGGTGGCGCCCAGCGTCATCAGCCGCATCAAGAT CATCTCCGGGCTGGACATCTCCGAGCGCCGCATCCCCCAGGACGGCCGGACCCGCGTGGTCGTCGACGGCGCGGCCATCG ACTGCCGCGTCTCGACGCTGCCCGCCCTGCACGGCGAGAAGATCGTGATCCGCCTGCTCACCCGCGGCGACGACGTCCCC TCGCTGCCCTCGCTCGGGTTCGAGCCGGAGCAGCTGGAGATCTTCGAGAAGGCCCTCAGCGTCCCGCAGGGCCTGGTGCT CATCACCGGCCCCACCGGGTCGGGCAAGACGAACACCCTCTACGCGGCGATCCACGCGACGATGTCGCCGGAGAAGAACA TCATCACCCTCGAGGACCCCGTCGAGGTCCAGCTGCCCGGCATCACCCAGGTGCAGGTGCACGCCAAGGTGGGCATGACG TTCTCCGCCGGCCTGCGCTCGGTCCTGCGCCAGGACCCCGACATCGTCCTCATCGGCGAGGTCCGCGACTCCGAGACCGC CGAGCTGGCGCTCAAGGCGTCGATGACGGGCCACCTGGTGCTGACGACCCTGCACACCAACTCCGCCGTGGGGGCGCTGA CGCGCCTGGTCGACATGGGCGCGGCGCCGTTCCTGGTGGCCAGCTCGCTGACCGCGGCGATCGCCCAGCGGCTGGTCCGC AAGCCCTGCGACTCCTGCGCGGACGGCTACATCCCCGACGAGGACGTCCTCGCCGTGCTGGACCTGACGATCGAGGACAT CCTCGACGCGACCCCGCTCAAGGGCACCGGCTGCCCCGAGTGCGGCGGCACCGGCTACCGCGGCCGCACCGCGGTCTACG AGGTCCTCGACGTGACCCCGAGCATGCGCAAGGTCCTCATGCACGACGCGACGGAGTCGGCGCTGCTGGCCGAGGCGGAG CGGATCGGGATGAAGACGCTGCGCCAGTCGGCGCTGGAGAAGGCGATGCGCGGGGAGACGACCTTCGAGGAGGTCATCCG CGTCACCGCCGGCTGA Protein sequence : MTTLDAPATSTGQVPLQPVPAQGQPATPVRRRLGDVLVEKGLLVPEDLDVALAEQRNVEGPRRRLGQILVELGMVSEAEL AQCLAELLQLEHVDLSRLTLAPDVVRLLPRAVAERCRVLVLDKTPEYLLVAAADPTNVLALDDVKLYTRTPELHVVVAMD SQIRDQLARAWSLTEDTSQVSRMVQDATEDDDEDPLAALNGSVDDDAPIVKLVNRILSDAVRLRCSDIHLESQRDQLRVR FRVDGLLRDVMSAPKRVAPSVISRIKIISGLDISERRIPQDGRTRVVVDGAAIDCRVSTLPALHGEKIVIRLLTRGDDVP SLPSLGFEPEQLEIFEKALSVPQGLVLITGPTGSGKTNTLYAAIHATMSPEKNIITLEDPVEVQLPGITQVQVHAKVGMT FSAGLRSVLRQDPDIVLIGEVRDSETAELALKASMTGHLVLTTLHTNSAVGALTRLVDMGAAPFLVASSLTAAIAQRLVR KPCDSCADGYIPDEDVLAVLDLTIEDILDATPLKGTGCPECGGTGYRGRTAVYEVLDVTPSMRKVLMHDATESALLAEAE RIGMKTLRQSALEKAMRGETTFEEVIRVTAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-85 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-85 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Krad_1156 | YP_001360908.1 | type II secretion system protein E | VFG1880 | Protein | 4e-86 | 45 |
| Krad_1156 | YP_001360908.1 | type II secretion system protein E | VFG2048 | Protein | 4e-85 | 42 |
