Gene Information

Name : smpB (SUN_0375)
Accession : YP_001357692.1
Strain : Sulfurovum sp. NBC37-1
Genome accession: NC_009663
Putative virulence/resistance : Unknown
Product : ssrA RNA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 385621 - 386082 bp
Length : 462 bp
Strand : -
Note : tmRNA-binding protein

DNA sequence :
TTGGCCATCAATATCGTAGCACAGAACAAAAAAGCCAGACACGATTATGAGATACTTGAAAAGTTCGAGGCGGGCATCGT
ACTCTCAGGTGCGGAGGTCAAAGCCCTGCGTGCCAAGCGCGCCAACCTTTCCGATGCTTTCTGCCGTTTCATCAAGGGTG
AACTCTACCTCATGAACGCCCATATCGCCCATCTTGAAACCGCCAACAAATATTTCACCCCCGATACCCGTGCCCCAAGA
AAACTGCTTCTGCATAAAAAAGAACTGGAAAAACTTTATGTCAAAGTACACAAGGACGGCCTGACCATTGTGCCCCTGAT
GATCTATTTCAATGAGCGTAACTACGCCAAAGTGAGCATTGCCATCGCCAAAGGGAAGAAGCTACACGACAAGCGCGCGG
ACATGAAAGCAAAAACACTCGACAGGGAAGCCAAAACGGCGATGAAGAACCGCTCCTACTGA

Protein sequence :
MAINIVAQNKKARHDYEILEKFEAGIVLSGAEVKALRAKRANLSDAFCRFIKGELYLMNAHIAHLETANKYFTPDTRAPR
KLLLHKKELEKLYVKVHKDGLTIVPLMIYFNERNYAKVSIAIAKGKKLHDKRADMKAKTLDREAKTAMKNRSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 5e-18 46
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 8e-16 44
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 8e-18 41