Gene Information

Name : SUN_0196 (SUN_0196)
Accession : YP_001357513.1
Strain : Sulfurovum sp. NBC37-1
Genome accession: NC_009663
Putative virulence/resistance : Unknown
Product : oligopeptide ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 201225 - 202838 bp
Length : 1614 bp
Strand : +
Note : -

DNA sequence :
ATGAGTACTATACTGAGTGTAGAAAACCTGAGTCTTGTCATAGCTAAAGAGCAGCTTTTGCGCTCTGTCAGCTTCGAGAT
CAAAGAGGGAGAGATCTTTGCACTGGTCGGAGAATCCGGTAGCGGGAAATCGCTGACCTCATTGGCCATTATGCGGCTGC
TTCCTGACAGCATCAATGTAGTTACGGGAGATATCAGACTCAAAGAACATTCTCTTTTTGACATTACGGAGTCGCAGATG
CAGAAGATCAGGGGCAAGTCCATAGCGATGATCTTTCAGGAGCCTATGTCTGCGCTCAACCCGGTGATGACAGTAGGAGA
GCAGGTGGCTGAAGTGATCCGACTGCATCTGGGACTCACAAAAGAAGCGGTAAAAAAGAAAGTGATCTCCCTCTTTGATG
AGGTGGGCATCAAAGACCCTTCAGAGCGTTATTTCTGGTATCCGCATCAGCTATCCGGTGGGCAGAAACAGCGTGTAATG
ATCGCAATGGCACTGGCATGTGAACCTGATCTGCTGATCGCCGATGAACCTACAACAGCACTGGATGTAACAATACAGGC
ACAGGTGCTCTCTTTGCTAAAGCAGATCAGGGAGAAGAGAAAACTTTCCATACTCTTCATTACCCATGACATGGGGGTAG
TCGCACAGATGGCGGACAGGATCGCCGTAATGAAAGAGGGAGAGTTGCTTGAAACAGCACCCCGTGATACATTTTTTGAG
CAGCCCAAACATCCCTATACGCAGCGGCTTCTGAAAGATGCCATTGCGATGCAGGCGAAAGAGACCGGAGAAGAAGGAGA
AACAACACTGCTTAAAGTCAAAGACCTAAAAGTCTATTTTCCGATCAAAAAAGGTCTCTTGCAGCGTACGGTCGGGTATG
TCAAAGCTGTGGATGGTGTCAACTTTGCCATACCCAAAGGCAAAACGCTTGCACTGGTAGGAGAATCGGGCAGCGGCAAG
AGTACGATTGGCAAAGCCATTTTGCGTCTGCTGGATATCACAAAAGGGACCATAGCCTTCAGAGATGTGAATATTGCAGA
ATTGAATGAAGCGTCCCTGAAAGCCTACCGAAGTAAAATTCAGGTGGTTTTTCAGGATCCCTACTCGGCACTCAATCCCC
GTATGACCATTGGTGAGATCATCCGTGAAGGGATGGTAAGCCTGAAGGTAGGCCCCAAAGAGAAAGAGGCTCAGGATATT
CGTATAGGGGAACTGCTTGAAAAGGTAGGATTGAAAAAAGAGTATACCGAGCGTTATCCGCATGAGTTCTCCGGGGGTCA
GCGACAGCGTATCGGTATTGCCAGAGCACTGGCGGTAGAACCTGAACTGATCATTTGTGATGAACCTACTTCTGCGCTGG
ATGTGACGGTAAGGTCACAGGTTCTTTCCCTGCTTAAAAAACTGCAGGATGACTTTGCTGTCTCCTACCTTTTCATTACC
CATGACCTCTCCCTTATCCCCTCCATTGCAGACGAAGTGGCTGTCATGCAGGAGGGAAAATTGGTAGAGCAGGGACCTGT
GGATGAGGTGATGCATAACCCTCAGCACGAATACACACGTACACTGCTCAAAGCCGTACCCAAGCCACCACCTATACAAA
AAGAGGAATTATGA

Protein sequence :
MSTILSVENLSLVIAKEQLLRSVSFEIKEGEIFALVGESGSGKSLTSLAIMRLLPDSINVVTGDIRLKEHSLFDITESQM
QKIRGKSIAMIFQEPMSALNPVMTVGEQVAEVIRLHLGLTKEAVKKKVISLFDEVGIKDPSERYFWYPHQLSGGQKQRVM
IAMALACEPDLLIADEPTTALDVTIQAQVLSLLKQIREKRKLSILFITHDMGVVAQMADRIAVMKEGELLETAPRDTFFE
QPKHPYTQRLLKDAIAMQAKETGEEGETTLLKVKDLKVYFPIKKGLLQRTVGYVKAVDGVNFAIPKGKTLALVGESGSGK
STIGKAILRLLDITKGTIAFRDVNIAELNEASLKAYRSKIQVVFQDPYSALNPRMTIGEIIREGMVSLKVGPKEKEAQDI
RIGELLEKVGLKKEYTERYPHEFSGGQRQRIGIARALAVEPELIICDEPTSALDVTVRSQVLSLLKKLQDDFAVSYLFIT
HDLSLIPSIADEVAVMQEGKLVEQGPVDEVMHNPQHEYTRTLLKAVPKPPPIQKEEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-89 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-89 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-89 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-89 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 1e-95 42