Gene Information

Name : arsB (SUN_1383)
Accession : YP_001358692.1
Strain : Sulfurovum sp. NBC37-1
Genome accession: NC_009663
Putative virulence/resistance : Resistance
Product : arsenic efflux pump protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 1431286 - 1432548 bp
Length : 1263 bp
Strand : +
Note : -

DNA sequence :
ATGATACTCGCAATGAGCCTCTTTCTGGTGACACTTCTCTTTGTCATCTGGCAACCCAGAGGACTTCAAATAGGAACAAC
TGCAGTGATCGGTGCTGTCGTGGCACTGCTGCTGGGTGTCGTCAGTTTCGATGACGTCATTATCGTAACCGACATCGTCT
GGGATGCCACGCTTGCGTTCATCGGTATTATCATCCTCTCCCTGGTACTCGACGAGATCGGATTTTTTGAATGGGCAGCC
ATCAAGATGGCAAAGCTCAGCGGCGGAAGCGGGAACAAGATGTTCGTTTACATCCTTTTGCTCGGTGCCATCGTTGCAGC
CTTCTTCGCCAACGACGGTGCGGCGCTCATCCTGACCCCCATCCTGCTGGCCAAGATGAAGTATCTCAAAATGAAGCCGC
TGCCCATCTTCGCCTTTTTGATGGCGGGCGGGTTCATCGGTGACTCAGCGTCCAACCCGCTGGTCATCTCCAACCTTACC
AACATCGTCACTGCCGGCTACTTCGACATCGGTTTCGTAGAGTATGCCAAGAACATGTTTCTGCCGAATCTCCTGAGTAT
TGTTGCCTCTATCGCTGTACTCTGGTTCTATTTCAGAAAAGATATTCCTTTAACAGTCGATGTCAATCAGCTCCCTGAAG
CCTCTTCGGTCATCAAGAACCGGACCATGTTCAAGCTCAGTTGGTTCTTCCTTGCCTTCCTGATGGTTGGGTATTTCATC
GGTGACCATTACCACCTGCCTGTCTCCGTCTTCGCCCTGGGCGGTGCACTTGTCTTTCTCACCATTGCAAACCACCATAA
GGCGACCAAGCCCATTATGACCATCAAAGCGGCACCATGGCAGGTGGTCTGGTTCAGTATCGGGCTCTATATCGTCGTGT
ATGGACTCAAAAATGCAGGCCTGACGGATGAAGTGGCTGCCTGGATAGAAATGCTAAGACATCAGGGAGAAACTACAGCG
ATCATCGGGACAGGTTTCCTCTCCGCAGTCATCTCTTCGATCATGAACAATATGCCGACCATCATGATCATGGACATCGC
CATCGATAAGGTGGGATATGTGGGTAACGAAGCACTGGTCTACGCTAACATCCTCGGCTCCAACCTCGGACCTAAAATGA
CGCCTATCGGATCACTCGCCACCCTGCTCTGGCTACATGTACTGGCACAAAAAGGTGTCAAGATCGGCTGGGGAGAGTAT
ATGAAAGTAGGACTGGTCATTACACCGCCTGTCCTTCTTGTGGCACTTTTGGGGTTACTGTAG

Protein sequence :
MILAMSLFLVTLLFVIWQPRGLQIGTTAVIGAVVALLLGVVSFDDVIIVTDIVWDATLAFIGIIILSLVLDEIGFFEWAA
IKMAKLSGGSGNKMFVYILLLGAIVAAFFANDGAALILTPILLAKMKYLKMKPLPIFAFLMAGGFIGDSASNPLVISNLT
NIVTAGYFDIGFVEYAKNMFLPNLLSIVASIAVLWFYFRKDIPLTVDVNQLPEASSVIKNRTMFKLSWFFLAFLMVGYFI
GDHYHLPVSVFALGGALVFLTIANHHKATKPIMTIKAAPWQVVWFSIGLYIVVYGLKNAGLTDEVAAWIEMLRHQGETTA
IIGTGFLSAVISSIMNNMPTIMIMDIAIDKVGYVGNEALVYANILGSNLGPKMTPIGSLATLLWLHVLAQKGVKIGWGEY
MKVGLVITPPVLLVALLGLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-99 58
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 6e-94 57
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 2e-97 56
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 7e-80 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_001358692.1 arsenic efflux pump protein BAC0575 Protein 3e-100 58
arsB YP_001358692.1 arsenic efflux pump protein BAC0574 Protein 1e-97 58
arsB YP_001358692.1 arsenic efflux pump protein BAC0577 Protein 4e-81 50
arsB YP_001358692.1 arsenic efflux pump protein BAC0031 Protein 2e-76 50
arsB YP_001358692.1 arsenic efflux pump protein BAC0578 Protein 2e-80 50
arsB YP_001358692.1 arsenic efflux pump protein BAC0576 Protein 1e-79 50