Gene Information

Name : fliQ (NIS_0633)
Accession : YP_001356104.1
Strain : Nitratiruptor sp. SB155-2
Genome accession: NC_009662
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 630889 - 631158 bp
Length : 270 bp
Strand : +
Note : -

DNA sequence :
ATGAGTGTTGATCAAGCTATTACGTTGGTAGAACAGATGTTAAAGATCACGGCACTGGTAAGTTTGCCTCCTTTAGCAAC
GGCCTTTGGAGTAGGACTTATCATTAGTATTTTCCAAGCAGCTACTCAGATCCAGGAGATGACACTTACATTTATTCCAA
AAATCATTGCAACGGTGGCGGCATTGATAATATTTGGCTCTTGGATGTTTGTTACATTGATCGATTATTATAAGTCGATT
TTTGATTCGATCACTCGATTAATCCAATGA

Protein sequence :
MSVDQAITLVEQMLKITALVSLPPLATAFGVGLIISIFQAATQIQEMTLTFIPKIIATVAALIIFGSWMFVTLIDYYKSI
FDSITRLIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escS AFO66341.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-07 46
escS AFO66401.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-07 46
escS YP_003223489.1 T3SS structure protein EscS Virulence LEE Protein 7e-06 42
escS YP_003232139.1 T3SS structure protein EscS Virulence LEE Protein 7e-06 42
escS AAK26701.1 EscS Virulence LEE Protein 5e-06 42
escS AAL57528.1 EscS Virulence LEE Protein 5e-06 42
escS CAC81848.1 EscS protein Virulence LEE II Protein 5e-06 42
escS CAI43888.1 EscS protein Virulence LEE Protein 9e-06 42
unnamed AAL06355.1 EscS Virulence LEE Protein 4e-06 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliQ YP_001356104.1 flagellar biosynthetic protein FliQ VFG2339 Protein 1e-11 45