Gene Information

Name : NIS_0283 (NIS_0283)
Accession : YP_001355754.1
Strain : Nitratiruptor sp. SB155-2
Genome accession: NC_009662
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 274686 - 275936 bp
Length : 1251 bp
Strand : -
Note : -

DNA sequence :
ATGACCCTATCCATCATCGGCCTTGGCTACGTAGGCTTACCACTAGCTGTGGAGTTTGGCAAAAAGTATGAAACGATCGG
ATTTGATATCAACGCAAACAGGATTGAAGAATTAAAAAAGGGAATCGATAGAACACTCGAAGTGAATGAAAAAGAACTCA
AAGAAGCAAAAAATCTCTCCTTCACAACTTCTATCGAAGATATCAAAAAAGCAAACATCTATATCGTTACCGTCCCAACA
CCCATCGATACACACAAAAATCCAGACCTCACTCCTCTTGTCATGGCTTCAAGAACTGTTGGAAGAGTCCTTAAAAAAGG
GGATATCGTTATCTATGAAAGCACCGTCTTTCCAGGATGTACCGAAGAGGTATGCGTTCCTGAACTGGAACGTGAAAGTG
GACTTACATTTAATAAAGACTTTTTCTGTGGCTACTCTCCCGAACGCATCAATCCAGGAGATAAAGAGCATCGTCTACCA
AATATCAAAAAAGTAACAAGCGGCAGTACTCCAGAGATTGCACAAAAAGTGGATGCACTCTATAAAAGTATTATCACAGC
TGGCACTCATCTAGCACCAAGCATCAAAGTAGCAGAGGCTGCAAAAGTGATAGAAAATGCCCAAAGAGATATCAATATAG
GTTTTGTCAATGAACTGGCACTCATCTTCGATAAACTAAATATCGATACACTCGATGTCTTAGAGGCCGCAGGAACCAAA
TGGAATTTCTTGCCATTTCGGCCAGGTCTTGTGGGAGGACACTGTATTGGAGTAGATCCATACTATTTGGCCTATAAAGC
AAAAGAGGTGGGATATCATCCACAAATCATCTTGGCTGGTCGAAGAACCAATGATGAGATGGGTGTCTTTGTAGCCAATA
AGGTGGTGAAACTGCTTATCCATAAAGGGCATAAAGTCAAAGGAAGCAAAGCGTTAGTACTTGGTATCACTTTTAAAGAG
AACTGTCCGGATATCAGAAATAGTAGAGTTATTGACGTCATCAACGAACTCCAAGATTTTGGAATCCATGTAGATGTATA
TGATCCATGGGCGGATAAAGAAGAAGTAGAGCATGAGTATGGCATAGAGCTTTTGGAAAAAAGTCCAGAGTTTAACGACT
ATGATGCTATCATTTTAGCCGTGGCTCACAATCAATTCAAGCAGCTTGATTTTTCAAAGAGGCCTGAATCGTGTGTGGTC
TATGATATTAAGGGTGTACTGCCAAAAGAGGTGGTGGATAAAAGGCTTTAG

Protein sequence :
MTLSIIGLGYVGLPLAVEFGKKYETIGFDINANRIEELKKGIDRTLEVNEKELKEAKNLSFTTSIEDIKKANIYIVTVPT
PIDTHKNPDLTPLVMASRTVGRVLKKGDIVIYESTVFPGCTEEVCVPELERESGLTFNKDFFCGYSPERINPGDKEHRLP
NIKKVTSGSTPEIAQKVDALYKSIITAGTHLAPSIKVAEAAKVIENAQRDINIGFVNELALIFDKLNIDTLDVLEAAGTK
WNFLPFRPGLVGGHCIGVDPYYLAYKAKEVGYHPQIILAGRRTNDEMGVFVANKVVKLLIHKGHKVKGSKALVLGITFKE
NCPDIRNSRVIDVINELQDFGIHVDVYDPWADKEEVEHEYGIELLEKSPEFNDYDAIILAVAHNQFKQLDFSKRPESCVV
YDIKGVLPKEVVDKRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 6e-124 64
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 6e-124 64
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-110 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NIS_0283 YP_001355754.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 2e-124 64