Gene Information

Name : NIS_1672 (NIS_1672)
Accession : YP_001357135.1
Strain : Nitratiruptor sp. SB155-2
Genome accession: NC_009662
Putative virulence/resistance : Virulence
Product : peptide ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1684457 - 1685119 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence : 
GTGCTCATTGAGTGTAAACATATCACAAAAAAGTATCGTACTGGTGATATCGAAACGACTGTTTTAAAGGATGTAAGTTT
CTGTGTCGAACAAGGCGAGTTCGTAGCCATCATGGGAAGCAGCGGAAGTGGAAAATCAACACTGCTCTATATCTTGGGAT
GCCTGGATAAGCCTTCTATGGGAGAGTATCGTATCAATGGAAACAATGTAGCCAACTTGAGCGACGATGAGCTTTCACAT
CTTCGAAACAGCATGTTTGGATTTATTTTTCAAGCTTTTTATCTCATTCCGTATCTCACTATCCTCGATAACGTTCTTGT
ACCAACGCTCTATGCCAAAACCTCTAAGTCGAAAGAGGATGCAAAAGCGCTCCTTGAAAAACTGCAACTCTTTGATAGGA
TAGATTTCTATCCAGATCAACTCTCAGGAGGCCAAAAGCAGCGGGTCGCCATCGCAAGAGCACTCATCAATGAACCCCAA
ATCATCCTCGCTGATGAGCCAACGGGGCAACTCGACACCAAAAATGCCAAAATAGTCATGGAGATTCTTAAAAACCTCAA
TGAAGAGGGACGCACAGTTATAGTAGTCACCCATGATGAAAACATGGCCAAATACGCTCAACGAGTGATTCGGATACAAG
ATGGTCAGATTCTATCTACGTGA

Protein sequence : 
MLIECKHITKKYRTGDIETTVLKDVSFCVEQGEFVAIMGSSGSGKSTLLYILGCLDKPSMGEYRINGNNVANLSDDELSH
LRNSMFGFIFQAFYLIPYLTILDNVLVPTLYAKTSKSKEDAKALLEKLQLFDRIDFYPDQLSGGQKQRVAIARALINEPQ
IILADEPTGQLDTKNAKIVMEILKNLNEEGRTVIVVTHDENMAKYAQRVIRIQDGQILST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 2e-31 43
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-34 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NIS_1672 YP_001357135.1 peptide ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-51 53
NIS_1672 YP_001357135.1 peptide ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-39 48
NIS_1672 YP_001357135.1 peptide ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-39 47
NIS_1672 YP_001357135.1 peptide ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-36 43
NIS_1672 YP_001357135.1 peptide ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NIS_1672 YP_001357135.1 peptide ABC transporter ATP-binding protein VFG0869 Protein 4e-24 41