Gene Information

Name : glnA (NIS_1519)
Accession : YP_001356983.1
Strain : Nitratiruptor sp. SB155-2
Genome accession: NC_009662
Putative virulence/resistance : Virulence
Product : glutamine synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1535104 - 1536549 bp
Length : 1446 bp
Strand : -
Note : -

DNA sequence :
ATGTTTCAAGTTGATGAGGCCAAGCTACAAAAACTCTTCGATACAATAAAAGAAGAGGAGATCGAGTTTGTTGACTTTCG
GTTTACAGATATCAAAGGAACTTGGCACCACGTGACGTACAATGTCAAAGCGGTTAATGAAGATACATTTAGAAATGGTC
TCCCTTTTGATGGAAGTTCTCTTCCAGCATGGCAGCCAATCAATAAATCGGATATGGTTTTGGTTCCTGAAGCGGGAACT
GAGTTTGTTGATCCGTTCACTGCAGATCCTACACTTGTAGTTATCTGTGATGTATATGATATCTATAAAAATCAACCATA
TGAGAAGTGTCCTAGAAGTATCGCAAAAAAAGCGCTTAAATATCTTCAAGAAAGCGGTATCGGTGATGTTGCATACTTTG
GTCCGGAAAATGAGTTTTTCGTATTTGACAATGTCAAAGTGAGAGATGAGATCAACTGCCAGTACTACGAAGTAGATACA
AGCGAAGGTGAGTGGAATAGAGGCGTTGATAGTCCAGAGTACGATGTGTATAATATCGGACACAGACCTGGTACAAAAGG
TGGATACTTCCCTGTTCCTCCAGTAGACTCTATGATGGATCTAAGAGCGGAGATGAGTCAAGTGATGGAAGAGGTAGGTC
TGGAAACTTATGTCATCCACCACGAAGTTGCACAGGGACAAGGTGAAATTGGTGTGAAGTTTGGAACACTCATCGAAGCA
GCTGATAATGTGCAAAAACTTAAATATGTAGTCAAAAATGTTGCGCACATCAATGGTAAAACTGCAACTTTTATGCCAAA
ACCACTCTATGGTGACAACGGAAACGGAATGCACACCCATATCTCGATCTGGAAAGATGGCAAAAACCTCTTTTATGATC
CAAACGGATATGCAAACCTTAGCCAGTTTGGTAAATATTTCATCGGTGGCGTTTTAAAACATGCTAAAGCAGTAGCTGCA
TTTACAAATGCTTCTACGAACTCTTATAAACGACTCATTCCTGGATTTGAAGCTCCTTCAATCCTTGCATATTCAGCACA
AAACAGAAGTGCAAGCTGTCGTATTCCTTGGGGAGCTGGTGAAAAGAGTGTACGGGCAGAGTTCCGATTTCCAGACAGCT
CTGGTAACCCATATCTTGCGTTTACTGCACTCCTTCTTGCTGGAATCGATGGAATCAAAAACAAAATCGATCCAGGTGAT
CCTATGGAGATGGATCTCTTTGAGCTTACTCTTGATGAGATTCGAGAAAAAGGTATCCAGCAGATGCCTCATACTCTAAG
AGAAGCGATCGAGAATATGCTTGCAAACAAAGATCTGTTCAAAGTTGGTGATGTTATGACTGAAGAGTTCATTCAAACAT
ATCAGCACTACAAATTTGAAACATCTATCTGGCCTTGGGAAGGTAGACCGCACCCATACGAGTTTATCACTACATACTCT
TGCTAA

Protein sequence :
MFQVDEAKLQKLFDTIKEEEIEFVDFRFTDIKGTWHHVTYNVKAVNEDTFRNGLPFDGSSLPAWQPINKSDMVLVPEAGT
EFVDPFTADPTLVVICDVYDIYKNQPYEKCPRSIAKKALKYLQESGIGDVAYFGPENEFFVFDNVKVRDEINCQYYEVDT
SEGEWNRGVDSPEYDVYNIGHRPGTKGGYFPVPPVDSMMDLRAEMSQVMEEVGLETYVIHHEVAQGQGEIGVKFGTLIEA
ADNVQKLKYVVKNVAHINGKTATFMPKPLYGDNGNGMHTHISIWKDGKNLFYDPNGYANLSQFGKYFIGGVLKHAKAVAA
FTNASTNSYKRLIPGFEAPSILAYSAQNRSASCRIPWGAGEKSVRAEFRFPDSSGNPYLAFTALLLAGIDGIKNKIDPGD
PMEMDLFELTLDEIREKGIQQMPHTLREAIENMLANKDLFKVGDVMTEEFIQTYQHYKFETSIWPWEGRPHPYEFITTYS
C

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-162 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_001356983.1 glutamine synthase VFG1399 Protein 2e-96 48