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Name : serS (NIS_1379) Accession : YP_001356844.1 Strain : Nitratiruptor sp. SB155-2 Genome accession: NC_009662 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1389400 - 1390644 bp Length : 1245 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : TTGATCGATCTAAGAGCATTGGAAAAAGACTTTGACACGATTGCAACAAGACTTCAGACAAAAGGCGTAGAAGAAAAAGT TTTGGCTGAACTCAAAGAGCTTTTTGAGGAGTATAAAAAAGAGAAAACTATTTTGCAAGAGCTTCAAACCAAACAAAACT CTCTTTCTAAAATGTTTGGCCAGTATAAAAGAGAAGGTAAAGATATCAATGAACTCAAAAATGAACTTGAGATCAATAAA GGTAAAATTGCAGCTCATCAAGAAGTGGTACGAGATCTTGAAGAAAAACTCAAAAATATCGCTCTTACCATTCCAAATCC ACCGGATCCAGATGTTCCCGTGGGAGAGAATGAGGAAGACAATGTGGTTCTCAAAACTGTTCTTGAGCCAAAAGGATTTG ATTTTGAACCAAAAGAGCATTGGGAACTTGGAGAAAAACTAGGCTGGATCGATTTTGAAAGAGGCGTAAAACTTGCCAAA AGCCGATTTAGTGTCTTGAAAAAAGAGGCGGCACGACTGGAGCGGGCCCTCATCAACTTCATGCTTGATCACAACAAAGA ATATGGATTTGAAGAGGTTTGCGTTCCTTTCATGGCAAACAGTGCAACCCTTCTTGGAACGGGACAACTTCCAAAATTTG AAGAGGATCTTTTCAAAATCTGCGATGAAGATCTTTATATGATTCCAACAGCTGAGGTTCCGCTAACAAACCTCTATAGA GATGAGATCATCAAGGATTTGGAAGATCCTATCAAGCTCACAGCCTATACGCCATGTTTTCGAAAAGAAGCAGGCAGTGG CGGACGCGATGTGCGAGGGATGATACGACAGCATCAGTTTGACAAAGTAGAACTCGTTGCCATCACAAGACCCGAAGAGA GCGACAAGGTCTTTGATGAGATGGTAAAGTGTGCTAGTAGCCTGTTAGCCAAACTTGGGCTTCCACACCGCCATGTGATG CTATGTACTGGCGATCTTGGCTTTAGCGCTGCAAAAACGATCGATCTTGAAGTGTGGCTACCGGGACAAGGAAAATACAG AGAGATCAGCTCCATATCCAATACAAGAGATTTTCAAGCCCGCCGGGCACAGATACGCTTTAAAGATGGCAAGAAAAACA GACTCGTTCATACGCTTAATGGCTCAAGCCTTGCAGTTGGCCGGACACTCATCGCCATCATGGAAAATTATCAACAAAAA GATGGTAGCATTGCAATACCAAAAGTACTTGAATCGTATCTATAG Protein sequence : MIDLRALEKDFDTIATRLQTKGVEEKVLAELKELFEEYKKEKTILQELQTKQNSLSKMFGQYKREGKDINELKNELEINK GKIAAHQEVVRDLEEKLKNIALTIPNPPDPDVPVGENEEDNVVLKTVLEPKGFDFEPKEHWELGEKLGWIDFERGVKLAK SRFSVLKKEAARLERALINFMLDHNKEYGFEEVCVPFMANSATLLGTGQLPKFEEDLFKICDEDLYMIPTAEVPLTNLYR DEIIKDLEDPIKLTAYTPCFRKEAGSGGRDVRGMIRQHQFDKVELVAITRPEESDKVFDEMVKCASSLLAKLGLPHRHVM LCTGDLGFSAAKTIDLEVWLPGQGKYREISSISNTRDFQARRAQIRFKDGKKNRLVHTLNGSSLAVGRTLIAIMENYQQK DGSIAIPKVLESYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-88 | 49 |
